| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28295 |
|---|
| Symbol | |
|---|
| ID | 5006172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009371 |
|---|
| Strand | + |
|---|
| Start bp | 165988 |
|---|
| End bp | 170172 |
|---|
| Gene Length | 4185 bp |
|---|
| Protein Length | 1394 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640421593 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422114 |
|---|
| Protein GI | 145355751 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.126458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.583249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCACG GCGGTAAGAC GACGAGCCGG TTGTCGATCG CGGATGAAAG TGAATTTCCG
TCGCTCGCGT CGGGGGCGCG AAGGAACCTG GCGATGGCGT TGGACGGCAC GGCGAGCGGG
GACGGAAAGC CGAGGCGAGT GGCGCCGACG CCGGTGGAGA CGAACGGAAC GAACGGAGCG
AGACCGCCCG TGGGGAACGG ATTTCACGCG CAAGTGACGC ACTGTGCGTC GCCGATGGGA
GGTGCGCGAC GAATCGCGCC GACGATGGTT TCGAGACCAG TGGATGGGGA TTTGTCGTCG
TCGTTTACGG CGTCGGGCGC GGCGACGCCG GCGAGCAAGC CGAGTAGTTT ATCCGCGTCG
CCGTCGTCCA TGATGAAACG CGCGGCGGCG ACTGCGACGG CGCTGACGCT GGAACGATTG
TATGTGAACG AGCCGAGACC GATGGAGCCG ATAGAGTTGC CGACGCCCTT GGCGATGTTG
GCGACGCTGC ACGCGGCGGC GCTGCGCGCG GGATTTCCGC TCGATCAGTC TCCGGAGCTC
GCGTGGTTGT GTGCGCTCTT GGGCGCGCCC TCAGACTTGG TCGTCGAAAC GATCGAGGGT
AGTGCAAAGC TCGTCATGCG TACTGGACGC GAGGCGCATG CGTACGCTTC AAAAGTGCTT
TCGCTCGTGC CGGCGCTCGC GTGCGCGCTC GGCGAAGGCG CGCTCGAAGC GCTCGCCGAG
TCCAACGTTT TAGCTTCGCA CGCTAGTGCG TTACATAGGG AAATAGTCCG TGAGTTGGGT
GCCGTGCGTG TCGCTTCGGG CGAGTGCGAG CGGGCGTATC AAGTAGACGG TCGCGTGGGA
AGCAAGCTGT ATGGATTCGA CTTGCTCGAC GCTTTGGCCA AGGCGGACGA GCGACGGGGT
CGCGCAAACG CCAGACCAGG TCGTGCGATT CCACTGACGG AAAATCAGGC GATAGAACAC
AACCGTGAAC GCACTCGAGA TGCGTTCTAT GCGCTCTTAC GCGCGTCGGC GAGCCGATCG
GTGGGTTTAG GTCAAGATGC GTCCATCGCA AGCCGCGCTC GAACGCTCAT CGCGAACACG
CATCCGGCAA ATATGCGGTG GCTTGCCGAT TTATTCGTCG CCCGTCTGTC ACAAAGCAGT
GCGGTAGGCG AAGTAGACGA AGAGCTTGGA AACAGCATCA CGCCGGCGCG CTTATCACGC
CTACACGAGC GCATAGTAGG AAGTAACGCA GCGACGCAAG CGCCGCAAGG AGGTAGGAGC
GGCGCGGGCG CGCGAGTCGA TGGTAGAGGT GGCCGAGGAG GACGTGGACG TACTCTTGGT
CGAGGAGGTG GAGAAAAATC CACGAACGGA GTGACGCAGA CCAACGGGTT TGGCGCTGAA
GTGACGCACA CGTGGCCGTC ATTTGTGTGC TTGTTCCCGC CTGCGCAACA GCCCTTCGTG
CGATTCATCG AAACGACGGA TTCGCACAAG TTTTGCGTCG CACTTCAACG CTCGCTTGTC
GCAGCGTTAC ATGTTCTTGA CCCGAATGCG CACCCGAGTG AAGACGCCGC GCAGTCTCCG
GCGAGTTCAT CGAACGCTGG GCAAACGGAA CGCATGTTGG CTGCTCACGC GATGGGCTCT
TTCTTGGGTT TACTCACTTT TGGATTCGCT TCAGGCGCGA CTTCTGCGCG TGTGGCGTCA
AATAATATGG CACTGCAAGG TATTGATTTG ACGTCGACGC TTCGGCGAGC CGGAAGACGT
GGAGAGCTCG TCGTGAGCGC GCCGTGGGTG CTCGCGTTTT TGCGCTTCCT GATGTGGGAC
GCAGATTCGC TCGATATCGC GCACTACGCC GAAGCACTGG CGTATTTGCG TGCAATCGCG
GCATCACCAT GCTTAGATCC GTTCGCTGTA AAAGGCGACT TCAATTCATC GCGCATGTGT
TTGCGATCCA TTTTAGCAAA TGGTTTGTCG GTGAATGCGC CGATTACGAC AGTGCAAGCC
TCGACTTGGA CCTCCAACAA CGTGATGGGT CTACCGCCAC CACCGCTCGC GGTGATGGAT
GCGTTGCCTA CGACAAGCAA GGAGATTATG CAATCGTACG AAGATCCTTT AGCGATTGAC
AGTTGGGGCA GGGAATGGGT TCCATCGGCT TCGGCGAACG CTAGCGCCAC GGCGAATTCT
CAAGAAGTAC CAGATTCGCC CTCCGAGTCG GACTCGAGGA TCGAAACACA AACTGCGCCA
GACTTGAGTC GTGTGGGCGT AGATCGTCGC TACGTCGAAA CTGTGTGCCC AAGCGTCGAC
CGTGCGGTGC GAACTTTGAA ACAACGAGGT GCCATCGCGC AAGCGCTCGT CGAAGAGAAA
GAACAACTCA CAAAGGAAGC ACCTCGTTCT TTGATGCACA CGCCATCGCA ACCGACGAAT
GTGCCTCGTC GAATGCAAGC GCAGCCACAG CGCGTAGAAC CAACTTCTGT GAGCAAGTCG
ACGCAAGCAC AAGACTTCGG CGGCGTCTTT GAAGCCAAAA ACACGCTTTC GCCAACCTTT
GGCGTGACTT CGCCAAACGC GGAGAGTGCA CTCGCAACAA TGCCGTCGAT GGATTTGAAA
TCTTCCTCGA CTGAAATTAA ACATGCACTG CAGCGTGCTT TCTTGCAGAA CGTTCCAGGT
CTGCGCCGTC TCGTCGACTT TGCCGTGGAC GCCGCAACGC TCGCTGCTGT CGATGACGCC
ACCGCGGCTA TCACCGCAAG CGCGGTAGAG AGCGCGCAAG AGGTTGTGAG TGCAGCGGCG
ACGCAGGCAG CGATGAAGTA TGCCGAGTCG GCGAAACGAA ACGGAACGTC GTTCGTTTCC
CATGCGAGTT CTGTCATCGA AGAAGCTTGG ACACCAGAGT TTGAGCGTGC AGTCGAGCGA
TCTGCAATGT CGGTGACGAG AGATGTCATA TCTTCTGTAG CAAGCACCGC CGCCGACGAC
GCGGGTGCAC GCGCCGCCGC CGCGGTTGCG GCACTTTCAG GTGCCAACAC GAGCCGAGGC
GGAGCAGCCG CGACTGGGGG ATCAAGCGCC GCGACGAGAG CAGCGTGCGG CGTCGCCGCT
GACGCGGCGG CGTTCGCGGC GGCGGATCGG GTGCGACGAA ATTTACCTTT CGAGCTTCAC
GCGCGCGTGG CGAGCGACGC ACGAAGGTTG TTGAAGTCAG CGCTCGGCGC GGCGAAAGAG
GCCATGAGCG CACCGGCGAC TGAAGAGACA GACACTCAGA AGTCATCCTC GCGTGAAGCC
GAGTACGCGA GCGTCGCCGC TTCGGCGATC GCAGCCGCGC TTTCTTCGGC GTCAAAGTGG
CCCGCAGGCA CCTTACTTGC CGAGTGTTCA TCTTTAAAGC TGCTCGCTGA TCGTAAGGCG
GACGCGTTAA CGCTCTCTCG CGGCATAAAA AGTGTCATCG AGTGCACCAG AAAAGTTCTC
GAACAAGACG CCAAATTTAT TCGCGTGCAA ACGAGTCGTA AGAAGCCTTC GACGCACGTT
GAAAAGCCGA TTCCCGACTC TAGACCTGGA GAGCAGCTCG CGTCGATGTT AGCCCAGCTC
GCGAGAGCGT ACGTCAAGCT TCTTCTCGCG GCGCCCCAAA ACGCGCTCTC GAAGACGACA
AAGGCAAAGG AGGCGGAGGA AGGCTGGGGA ATATCGCGGG ACGAAGTGTG CGAAGGTCTC
ACCGCCACGC TCATCGCCAC GTTTACCGCA TCTGCACCGG CATTAAACCT CGTGTCGGCC
TTAGCGCCAC CGGACTCACC CGATCCTTGG AAGCGTGTGT ACGACGAAAT GTTCGCCGGC
GAACTCTGGC TCGCCGCGCT TCGCGAGTTC CCCGAGAGCC CGTTCGCTCA AAAGCGAATT
GAACTCATCT TCGCCGAGGC CATCTCAAAA CTGCCGCGAC GCTCCGTGTT GCGCACTGCC
TTTCTCCACC TCATTGACGA CGCCGACAAG CGCGTCGGTC GACTCGGGCA CGCCCTCGCG
ATTCGCGGCG CGATTCGTTT CTGCGCCGTC GTCGCCGCGA GCGCGACGCA CGACGACGCC
GAAGAAGTCA CCGCCATCGC CGCCTTCGCC GAAGATCTTC GTCAGCGATG CGAAGCCGCG
GGCGAAAACA GGCTCGCTAG ACGCGCCGAG GGCGCGCACC GGTCGCTCAC GTCGGGATCC
GTGTACGCCA ACATCAAATC CGTCGCGACT CCGACAAAGT CGTAG
|
|---|
| Protein sequence | MRHGGKTTSR LSIADESEFP SLASGARRNL AMALDGTASG DGKPRRVAPT PVETNGTNGA
RPPVGNGFHA QVTHCASPMG GARRIAPTMV SRPVDGDLSS SFTASGAATP ASKPSSLSAS
PSSMMKRAAA TATALTLERL YVNEPRPMEP IELPTPLAML ATLHAAALRA GFPLDQSPEL
AWLCALLGAP SDLVVETIEG SAKLVMRTGR EAHAYASKVL SLVPALACAL GEGALEALAE
SNVLASHASA LHREIVRELG AVRVASGECE RAYQVDGRVG SKLYGFDLLD ALAKADERRG
RANARPGRAI PLTENQAIEH NRERTRDAFY ALLRASASRS VGLGQDASIA SRARTLIANT
HPANMRWLAD LFVARLSQSS AVGEVDEELG NSITPARLSR LHERIVGSNA ATQAPQGGRS
GAGARVDGRG GRGGRGRTLG RGGGEKSTNG VTQTNGFGAE VTHTWPSFVC LFPPAQQPFV
RFIETTDSHK FCVALQRSLV AALHVLDPNA HPSEDAAQSP ASSSNAGQTE RMLAAHAMGS
FLGLLTFGFA SGATSARVAS NNMALQGIDL TSTLRRAGRR GELVVSAPWV LAFLRFLMWD
ADSLDIAHYA EALAYLRAIA ASPCLDPFAV KGDFNSSRMC LRSILANGLS VNAPITTVQA
STWTSNNVMG LPPPPLAVMD ALPTTSKEIM QSYEDPLAID SWGREWVPSA SANASATANS
QEVPDSPSES DSRIETQTAP DLSRVGVDRR YVETVCPSVD RAVRTLKQRG AIAQALVEEK
EQLTKEAPRS LMHTPSQPTN VPRRMQAQPQ RVEPTSVSKS TQAQDFGGVF EAKNTLSPTF
GVTSPNAESA LATMPSMDLK SSSTEIKHAL QRAFLQNVPG LRRLVDFAVD AATLAAVDDA
TAAITASAVE SAQEVVSAAA TQAAMKYAES AKRNGTSFVS HASSVIEEAW TPEFERAVER
SAMSVTRDVI SSVASTAADD AGARAAAAVA ALSGANTSRG GAAATGGSSA ATRAACGVAA
DAAAFAAADR VRRNLPFELH ARVASDARRL LKSALGAAKE AMSAPATEET DTQKSSSREA
EYASVAASAI AAALSSASKW PAGTLLAECS SLKLLADRKA DALTLSRGIK SVIECTRKVL
EQDAKFIRVQ TSRKKPSTHV EKPIPDSRPG EQLASMLAQL ARAYVKLLLA APQNALSKTT
KAKEAEEGWG ISRDEVCEGL TATLIATFTA SAPALNLVSA LAPPDSPDPW KRVYDEMFAG
ELWLAALREF PESPFAQKRI ELIFAEAISK LPRRSVLRTA FLHLIDDADK RVGRLGHALA
IRGAIRFCAV VAASATHDDA EEVTAIAAFA EDLRQRCEAA GENRLARRAE GAHRSLTSGS
VYANIKSVAT PTKS
|
|---|
| |