| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28272 |
|---|
| Symbol | |
|---|
| ID | 5006163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009371 |
|---|
| Strand | - |
|---|
| Start bp | 123025 |
|---|
| End bp | 124793 |
|---|
| Gene Length | 1769 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | |
|---|
| GC content | 65% |
|---|
| IMG OID | 640421584 |
|---|
| Product | DASS family transporter: 2-oxoglutarate/malate |
|---|
| Protein accession | XP_001422207 |
|---|
| Protein GI | 145355948 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | [TIGR00785] anion transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.133761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.927166 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCGACGCTC GACGCGAACG ATGCGCGCGG TGATGAGCGC GAGAGCGATC GGCGCGCGCG
TCGACGCGCG CGCGCGCGAC GGCGCGACGA AGGGACGACG CGCGCGAACG ACGACGACGA
CGACGGGACG ACGCGCGCGA ACGACGACGA CGGCGACGAC GATGGCGCTG CCGACGACGC
GCGGAGACGC GCACGCGCGC GCGTGCGCGT GTGCGACGTG CGCGAGCGCG CGAGGCGCGG
CGGGCGCGAC GCGAGCGCGA CGGCGAGAGG CGGTGGTCGC GGGCGCGGCG CGCGCGGCGA
ACGCGAGCGC GGCGGCGACG CCGTTCGTGT GGAAGGGAGC GAATTTGGTC CCGCTCGCCG
CGTCCGTGGG CGTGGGGTTG GTGGTGAACT TTATTGTGCC GCGACCGGAG GCGGTCGTGC
CGCAGGCGTG GGCGCTGTTG AGCATTTTTT TGTCGACGAT TTGCGGGCTC GTGTTGGGGC
CGTTGCCGGT GGGGGCGTGG GCGTTCGTCG GGTTGACCAC GGCGGTGGTG ACGAAGACGC
TGAGCTTTCA AGCGGCGTTC GGAGCGATGA CGAATGATGT GATTTGGCTC ATCGTGCTCG
CGTTCTTCTT CGCGCGCGGT TTCGTGCGCA CGGGGTTGGG CGACCGCGTG GCGACGATGT
TCGTGCGCGC GCTCGGCAAG TCTACGCTCG GTCTGTCTTA CGGTCTGACC ATCTCTGAGG
CTTTGCTCGC GCCCGCGATG CCGTCCACGA CGGCGCGCGC GGGTGGGGTG TACTTGCCCA
TCATCACGTC CCTCGCCAAG CAGGCGGGGT CAGAGCCGGG GCCGACGTCG CGCAAGCTCG
GGGCGTTTTT GGTGCAAACG CAACTGCAAT CGAGCGGACA CTCGAGCGCG ATGTGCATGA
CCGCGGCGGC TCAAAACTTG TTGAGTCTCA AGCTCGCGGC TTCTCTCGGC ATCATCGTCG
CTTCGCCGTG GATCACGTGG TTCAAGGCGG CGTGCGTCCC GGCGATCATC GGTTTGCTCG
TCACCCCGCT CTTGGTGTAC AAGTTGTACC CACCGGAGGT GCAAAGCACG CCCGACGCTC
CCGCGGAGGC GGCGGCAAAG CTGAAAGAAC TCGGTCCTTT GTCTCAAGAT GAGCTCATGG
TCGTCGCTAC GATGAGCATC ACGGTGTTCA TGTGGATTTT CCAACCCTTT GGCATCGCGC
CCGTCGTCGC CGCCATGTTC GGGATGTCCC TTCAACTCAT CTCCGGCGTC ATTTCCTGGG
CCGAGTGCTT GAACGAAAAG GGCGCTTGGG ATACGTTGTT GTGGTTCGCC GTCTTGATCG
GTATGTCTGG TCAGCTCAAC GCCCTGGGTT TCATCGATTA TCTCTCCACC ACCGTCGCCG
GCGCATTGAC GGCGGCCAAC TTGGCGTGGC CGCAAGTCAT GCTTTTGCTC CACGGTTGCT
ACTTTTCCAT TCACTACTTG TTCGCGTCTC AAACCGCGCA AGTCGCCGCG CTTTCCACGG
CGTTCATGGC GATGATGATG GCTGCCGGCG CGCCGCCCAT ATTGGTCGGC CTCACCATGG
CTTTCCACAC CAACCTCTTC GGCGGCATCA CGCACTACGC CTCGGGGCAA TCCGCGTGCT
ACTTCGGCGC CGGCTTCGTC GAGCTTAAGG ATTACTTCCG CATCGGCGCC ATCTGTGGCG
TCGCCAACGT TCTCATCTGG CTCGTCTTCG GCGGTCTTTG GTGGAAGGTG ATCGGTCTTT
ATTAGTGGGG CGTGAATTTT TCTGTTCTC
|
|---|
| Protein sequence | MALPTTRGDA HARACACATC ASARGAAGAT RARRREAVVA GAARAANASA AATPFVWKGA
NLVPLAASVG VGLVVNFIVP RPEAVVPQAW ALLSIFLSTI CGLVLGPLPV GAWAFVGLTT
AVVTKTLSFQ AAFGAMTNDV IWLIVLAFFF ARGFVRTGLG DRVATMFVRA LGKSTLGLSY
GLTISEALLA PAMPSTTARA GGVYLPIITS LAKQAGSEPG PTSRKLGAFL VQTQLQSSGH
SSAMCMTAAA QNLLSLKLAA SLGIIVASPW ITWFKAACVP AIIGLLVTPL LVYKLYPPEV
QSTPDAPAEA AAKLKELGPL SQDELMVVAT MSITVFMWIF QPFGIAPVVA AMFGMSLQLI
SGVISWAECL NEKGAWDTLL WFAVLIGMSG QLNALGFIDY LSTTVAGALT AANLAWPQVM
LLLHGCYFSI HYLFASQTAQ VAALSTAFMA MMMAAGAPPI LVGLTMAFHT NLFGGITHYA
SGQSACYFGA GFVELKDYFR IGAICGVANV LIWLVFGGLW WKVIGLY
|
|---|
| |