Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_28016 |
Symbol | |
ID | 5005870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009370 |
Strand | + |
Start bp | 106304 |
End bp | 108113 |
Gene Length | 1810 bp |
Protein Length | 536 aa |
Translation table | |
GC content | 60% |
IMG OID | 640421291 |
Product | predicted protein |
Protein accession | XP_001421841 |
Protein GI | 145355172 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.089283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGCGACGCGC GACGCGCGCG ACGACGCGCG ACGCGCGCGA ACGGATCGCG ATCCTCGCTG CGTCGTAAAC CGACGCGCGC GACGAGCGAC GACGACCGCG CGCGCAGCGA CGACGCGAAA CGCAAAAAGT TCAAAAACAT AGAATCGCCG CCGCGCTGGG TCGAGGCGAT CGGCGAGAAA TCAGCGCGCG CTCGCGACAT GGCGCGCGAA CACTGGAGCT CGGACGCGTG GACGATAGAT CCTGGTATAT TTGACCTGCG CGCGCTCACG CCGACGCCGC AGACGGATGG AGGAGGGAAA GAGAAACAGA AAGAGGAGCT GACGAAGAGC GGACCGTCAA AGGCGTCGAC GACGACGCAG GCGGGAACGA GCTCGCACGG GAAGGCGACG GAGGATGCGC TGCGATTGTG TGAGGTCGAT GGGTGCGAAG AGCGAAGGAG CTCGCACCGC GGCGCGGGAC TGTGCGATAA ACATCGACAC GCAGAGTCGT TCGTCGTGCG AGGGGCAAAC GGAGGGAAAC CGATGCGGTG GTGCTTTTAT TGTCATCGCG CGCACGATTT GGGAAAGTTT ACCTCGGCGA GTCGGTCGAT TTGCTATGAG AAATTCACGC TGAGACAGGG ACGGAGGGCG GAGAAGAAGC ATCAGGAGGC GCGAAAGGCG GCGTCGGCGT CGGCGGTGCT GGGAGCGTTC GGCGCGCCGG GCACGAACAG TGGCGGGGAT AGCGGAGAGA CATCGGCGAT TGATACTTCG CTGTCGAAGG CTCTTAGTCA GGTGCCGCTC GTGGATGCGA TTGTGATGAA GCATCGCTCG CAAGTCGTCC CTCAGGGCTA CGACACAAAG TTTTGGGTCG CGCATCCGCG TGAGCTTCAG GAACGCATGG ACATGTGGGA TCTCGTGCGT CGATTGAACT CCACGGAAGA GCCGGTGGGA ATGTACGGGA CTATCGTTCC AGGGTGCGTG CGTTTCACCG TTCGCGGTTG GCAAGGCACG GAAGCGACGC TCGCGATGCA ACCGTTGGAT CGACGCGGCG TGTTCGCCCT CGGCGACGAG CGCTCCGTCT CCGTGAGCGA GATGGCGGCG TTGGACATGA AGCCGAGACG CGTCTTCATC AATAAACGCG GGAGCGTCAC GCGAGGCCCT GTCGGTGCGT GCGGAGAGGC GATCATCGAC GCCGTCTTCG CGAGCGCTCG AGAAAAGCTG TACGTTCGAA CACCGCGAGA TCCACGCGTG AACAAAATCC CCGTGCGCTT CTTCTCCGAA TACGTCGATC GTGAGGTGTC GTGCGTGGAC ACAGAGGAGT TTGTTTCAAT CTGTCCGTTG TCCGATGCCG GAACGCGTGG CGCAGTGATA GATCACGTGC TGTCGATTCA GTGCGGCGGT TACGGCGCGC CTTACGAGCA CGTCGCCGTC ATCGAAGACG AAGACATCGC GCGCGAACTC GTCGAGTTAG ACGCATCTAC GACAGGTATC GAGGCGAGAA AAGCGTTGCG TAGGTTTGCT TTAGATTACG TATGGCTTTC GAGTAGCATC GAGACGGCGA TGTTTTACGA GGAAGACGTC AAACGCGCGA TGTACATCAT CGACTCGGCG CGAAATATTT TCGGCGCATG GGGACGGGCG CCGAGCGCGC TCGCTCGAGT GGAGACGCTG CGAACAGAAA TCGTAGAGTT TGGCACGTCG ATTTCGGATG AATCACGGTG TCGTCCGAGG GTTACCTCGT TTCTGGAGAC GAAGAAAATA AGAGCGCGGC CACCGATTTT TTACGGCGCG ACAACTTTGC TGCTCCGCAA AGAAAACTCA TCGATATAAC
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Protein sequence | MAREHWSSDA WTIDPGIFDL RALTPTPQTD GGGKEKQKEE LTKSGPSKAS TTTQAGTSSH GKATEDALRL CEVDGCEERR SSHRGAGLCD KHRHAESFVV RGANGGKPMR WCFYCHRAHD LGKFTSASRS ICYEKFTLRQ GRRAEKKHQE ARKAASASAV LGAFGAPGTN SGGDSGETSA IDTSLSKALS QVPLVDAIVM KHRSQVVPQG YDTKFWVAHP RELQERMDMW DLVRRLNSTE EPVGMYGTIV PGCVRFTVRG WQGTEATLAM QPLDRRGVFA LGDERSVSVS EMAALDMKPR RVFINKRGSV TRGPVGACGE AIIDAVFASA REKLYVRTPR DPRVNKIPVR FFSEYVDREV SCVDTEEFVS ICPLSDAGTR GAVIDHVLSI QCGGYGAPYE HVAVIEDEDI ARELVELDAS TTGIEARKAL RRFALDYVWL SSSIETAMFY EEDVKRAMYI IDSARNIFGA WGRAPSALAR VETLRTEIVE FGTSISDESR CRPRVTSFLE TKKIRARPPI FYGATTLLLR KENSSI
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