Gene OSTLU_28016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28016 
Symbol 
ID5005870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp106304 
End bp108113 
Gene Length1810 bp 
Protein Length536 aa 
Translation table 
GC content60% 
IMG OID640421291 
Productpredicted protein 
Protein accessionXP_001421841 
Protein GI145355172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.089283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCGACGCGC GACGCGCGCG ACGACGCGCG ACGCGCGCGA ACGGATCGCG ATCCTCGCTG 
CGTCGTAAAC CGACGCGCGC GACGAGCGAC GACGACCGCG CGCGCAGCGA CGACGCGAAA
CGCAAAAAGT TCAAAAACAT AGAATCGCCG CCGCGCTGGG TCGAGGCGAT CGGCGAGAAA
TCAGCGCGCG CTCGCGACAT GGCGCGCGAA CACTGGAGCT CGGACGCGTG GACGATAGAT
CCTGGTATAT TTGACCTGCG CGCGCTCACG CCGACGCCGC AGACGGATGG AGGAGGGAAA
GAGAAACAGA AAGAGGAGCT GACGAAGAGC GGACCGTCAA AGGCGTCGAC GACGACGCAG
GCGGGAACGA GCTCGCACGG GAAGGCGACG GAGGATGCGC TGCGATTGTG TGAGGTCGAT
GGGTGCGAAG AGCGAAGGAG CTCGCACCGC GGCGCGGGAC TGTGCGATAA ACATCGACAC
GCAGAGTCGT TCGTCGTGCG AGGGGCAAAC GGAGGGAAAC CGATGCGGTG GTGCTTTTAT
TGTCATCGCG CGCACGATTT GGGAAAGTTT ACCTCGGCGA GTCGGTCGAT TTGCTATGAG
AAATTCACGC TGAGACAGGG ACGGAGGGCG GAGAAGAAGC ATCAGGAGGC GCGAAAGGCG
GCGTCGGCGT CGGCGGTGCT GGGAGCGTTC GGCGCGCCGG GCACGAACAG TGGCGGGGAT
AGCGGAGAGA CATCGGCGAT TGATACTTCG CTGTCGAAGG CTCTTAGTCA GGTGCCGCTC
GTGGATGCGA TTGTGATGAA GCATCGCTCG CAAGTCGTCC CTCAGGGCTA CGACACAAAG
TTTTGGGTCG CGCATCCGCG TGAGCTTCAG GAACGCATGG ACATGTGGGA TCTCGTGCGT
CGATTGAACT CCACGGAAGA GCCGGTGGGA ATGTACGGGA CTATCGTTCC AGGGTGCGTG
CGTTTCACCG TTCGCGGTTG GCAAGGCACG GAAGCGACGC TCGCGATGCA ACCGTTGGAT
CGACGCGGCG TGTTCGCCCT CGGCGACGAG CGCTCCGTCT CCGTGAGCGA GATGGCGGCG
TTGGACATGA AGCCGAGACG CGTCTTCATC AATAAACGCG GGAGCGTCAC GCGAGGCCCT
GTCGGTGCGT GCGGAGAGGC GATCATCGAC GCCGTCTTCG CGAGCGCTCG AGAAAAGCTG
TACGTTCGAA CACCGCGAGA TCCACGCGTG AACAAAATCC CCGTGCGCTT CTTCTCCGAA
TACGTCGATC GTGAGGTGTC GTGCGTGGAC ACAGAGGAGT TTGTTTCAAT CTGTCCGTTG
TCCGATGCCG GAACGCGTGG CGCAGTGATA GATCACGTGC TGTCGATTCA GTGCGGCGGT
TACGGCGCGC CTTACGAGCA CGTCGCCGTC ATCGAAGACG AAGACATCGC GCGCGAACTC
GTCGAGTTAG ACGCATCTAC GACAGGTATC GAGGCGAGAA AAGCGTTGCG TAGGTTTGCT
TTAGATTACG TATGGCTTTC GAGTAGCATC GAGACGGCGA TGTTTTACGA GGAAGACGTC
AAACGCGCGA TGTACATCAT CGACTCGGCG CGAAATATTT TCGGCGCATG GGGACGGGCG
CCGAGCGCGC TCGCTCGAGT GGAGACGCTG CGAACAGAAA TCGTAGAGTT TGGCACGTCG
ATTTCGGATG AATCACGGTG TCGTCCGAGG GTTACCTCGT TTCTGGAGAC GAAGAAAATA
AGAGCGCGGC CACCGATTTT TTACGGCGCG ACAACTTTGC TGCTCCGCAA AGAAAACTCA
TCGATATAAC
 
Protein sequence
MAREHWSSDA WTIDPGIFDL RALTPTPQTD GGGKEKQKEE LTKSGPSKAS TTTQAGTSSH 
GKATEDALRL CEVDGCEERR SSHRGAGLCD KHRHAESFVV RGANGGKPMR WCFYCHRAHD
LGKFTSASRS ICYEKFTLRQ GRRAEKKHQE ARKAASASAV LGAFGAPGTN SGGDSGETSA
IDTSLSKALS QVPLVDAIVM KHRSQVVPQG YDTKFWVAHP RELQERMDMW DLVRRLNSTE
EPVGMYGTIV PGCVRFTVRG WQGTEATLAM QPLDRRGVFA LGDERSVSVS EMAALDMKPR
RVFINKRGSV TRGPVGACGE AIIDAVFASA REKLYVRTPR DPRVNKIPVR FFSEYVDREV
SCVDTEEFVS ICPLSDAGTR GAVIDHVLSI QCGGYGAPYE HVAVIEDEDI ARELVELDAS
TTGIEARKAL RRFALDYVWL SSSIETAMFY EEDVKRAMYI IDSARNIFGA WGRAPSALAR
VETLRTEIVE FGTSISDESR CRPRVTSFLE TKKIRARPPI FYGATTLLLR KENSSI