| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_26614 |
|---|
| Symbol | |
|---|
| ID | 5004482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | + |
|---|
| Start bp | 522446 |
|---|
| End bp | 524130 |
|---|
| Gene Length | 1685 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640419903 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420369 |
|---|
| Protein GI | 145352044 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0261513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.318168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TCCGACGCCG AGACGCGCGC GCGATGCTGC GACGATGCGC GAAACGCGTC CTCACGTCGT
CCGCGACGCT CGTCCGCGAC GCGCGATCGA CGCACGCGCT GGAACCGACG CGAATGATGT
TTTCGAGCGT CGCGATCGGG ACGCCTCGTA AACTCGTCAC CCCTCGGAAA CCGCTCGCGA
GGACGCTCGC GCGCGCGTTC GCGACGTCGG GCGAAGAGCA AGACGTCGTC ATCGTCGGCG
GTGGGCCGGG AGGGTACGTC GCCGCGATCA AGGCGGCGCA ACTCGGGTTG AAGGTGACGT
GCGTCGAGGG ACGAGGGACC CTGGGCGGGA CGTGCCTGAA CGTCGGGTGC ATCCCGAGCA
AAGCGCTGCT GAACGCGAGC CACAAGTACG AGGAAGCGAA ACATGGGATG GCGAAACACG
GAATCACGTT CGGCGGTGAG GTCGCGATCG ACGTGGAGAC GATGATGGGA CACAAGAGTA
AAGCGGTGAC GGGGTTGACC AAAGGCATCG AGGGACTGTT CAAGAAGAAT AAGGTGACGT
ACGCGAAAGG GTGGGGGAAG CTCTTGAGCG CGAACGAAGT GAACGTGACG ATGGAGGACG
GAAGCTCGGA GGTGATTAAG ACGAAGAATG TGGTGCTGGC GACTGGGTCG GTGCCGAGCG
CGTTGCCGGG GGTGGATGCG GATGAGGAAA CCATCGTCAC GAGCACGGGG GCGCTGGAAT
TGAAAAAGGT TCCGGAAACC ATGGTTGTTA TCGGAGGCGG GGTCATCGGA CTCGAACTTG
GCAGCGTGTG GAGCCGATTG GGGGCGAAAG TCACCGTGGT GGAATTTGCG GATAAAATTT
GCGGCGCAGG GATCGACGAC GAGATTCGCA CGACGTTTCA GCGCTCGCTC AAGAAGCAAG
GATTCAACTT TAAGTTATCC ACTAAAGTCA CCAAGGCGGT CAAGAAACCG GAAGGTGGAG
TCACTTTGAC CCTCGAACCG TCCGCGGGCG GTGAGCAAAC CGAACTCGAG GCTGATATCG
TGCTCGTGTC CACCGGGCGC CGTCCGTTCA CCGACGGTCT CGGATTGGAA GACGTCGGCG
TGGAGACGAA CAGGATGGGT CAAATTGTCA TTGAACCGCA CACTTTCAAG ACCAACGTCC
CGGGCGTGTT CGCGATCGGT GACATCGTCG CGGGTCCGAT GCTGGCGCAC AAGGCTGAAG
AAGAAGGCGT CTCCGTCGTC GAGCAAATCG CCGGTAAAAA GGGACACGTC AACTACGACA
CGATCCCCTC CGTCATTTAC ACCCACCCCG AAGTCGCTTG GGTCGGGAAG ACTGAGGCGG
AAGTCAAAGA AATGGGCATC GAATACATCG TCGGTAAGTT TCCGCTCGCC GCCAACTCTC
GCGCGCGGGC CAACGACGAT TCTGAAGGCG TGGTGAAATT CCTCACCGAC AAGGCCACCG
GGAAGATTCT CGGCGCGCAC ATCGTTTCCG GCGGTGCCGG TGAACTTCTC GCCGAGTGCG
TGCTCGCCAT GGAGTACGGC GCTACGGCTG AAGACATCGC GCGCACGTGC CACTCGCACC
CGACGGTTTC TGAGGCTGTC AAGGAAGCCG CGATGGCCGC GACGCCGGGA ATGGGTTCCA
TTCACTTTTA AACTCGCAGC GCTGCTTCAT GTACAGTTTT AAGAACAAAC AAATCTACTG
ACTAC
|
|---|
| Protein sequence | MFSSVAIGTP RKLVTPRKPL ARTLARAFAT SGEEQDVVIV GGGPGGYVAA IKAAQLGLKV
TCVEGRGTLG GTCLNVGCIP SKALLNASHK YEEAKHGMAK HGITFGGEVA IDVETMMGHK
SKAVTGLTKG IEGLFKKNKV TYAKGWGKLL SANEVNVTME DGSSEVIKTK NVVLATGSVP
SALPGVDADE ETIVTSTGAL ELKKVPETMV VIGGGVIGLE LGSVWSRLGA KVTVVEFADK
ICGAGIDDEI RTTFQRSLKK QGFNFKLSTK VTKAVKKPEG GVTLTLEPSA GGEQTELEAD
IVLVSTGRRP FTDGLGLEDV GVETNRMGQI VIEPHTFKTN VPGVFAIGDI VAGPMLAHKA
EEEGVSVVEQ IAGKKGHVNY DTIPSVIYTH PEVAWVGKTE AEVKEMGIEY IVGKFPLAAN
SRARANDDSE GVVKFLTDKA TGKILGAHIV SGGAGELLAE CVLAMEYGAT AEDIARTCHS
HPTVSEAVKE AAMAATPGMG SIHF
|
|---|
| |