| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_26284 |
|---|
| Symbol | |
|---|
| ID | 5004183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009364 |
|---|
| Strand | - |
|---|
| Start bp | 539295 |
|---|
| End bp | 542542 |
|---|
| Gene Length | 3248 bp |
|---|
| Protein Length | 976 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640419604 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420206 |
|---|
| Protein GI | 145351701 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
|---|
| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0122884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.247759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCGC TCATCGCATC CGGCGCGCGG GCGGTCTCGA CCGAAGCGCT GAAGCCGCTG
GACACGTTCG AGCGACGACA TAACTCCGGA ACGACGCAAG AAGTGGCGGA GATGTGCGCG
GTGATCGGGT TCAAGGACAT CGACGCGCTG ATCGACGCGA CGGTGCCGGA AAATATTCGC
CTGAAGAAGA CGATGGACAT GGGCGAGTAC ACGCAGCCGC TCACGGAGAG CGAATTCTTG
ACGATGATGA AGAACATGGC GAGCAAGAAT AAGGTTTTTA AGAACTACAT CGGGACCGGG
TATCACGGCA CGCACGTGCC GACGGTGATT TTGCGTAACA TTTTGGAAAA TCCGGGGTGG
TACACGCAGT ACACGCCGTA CCAGGCGGAG GCGTCGCAAG GACGCCTGGA ATCGTTGTTG
AACTTTCAAA CGATGATTAC CGACTTGACC GGCATGCCGC TGTCTAACTC GTCGTTGTTG
GACGAAGGCA CGGCTGCGGC GGAGGCGATG ACGATGTGCT CTGCGTTGAA CCGCGGTAAG
AAGCCGAAGT TCTACGTGTC GAACAAGTGC CACCCGCAAA CCATCGCGGT GGTGCAGACG
CGCGCCGAAG GTTTGGGTCT CGAAGCCGTC GTGGGCGATG AGAACTCTTT CGATTACACC
GCGAAGGATG TCTGCGGCGT TCTCGTGCAA TACCCGGCCA CGGATGGTTC GATCATCGAC
TACAAGCCCA TCGTGTCCCA GGCGCAAGCC AACGGCATTC GCGTCGTCGC CGCCGCCGAC
TTGTTGTCGC TCACCATGTT ACAACCTCCG GGTGAATGGG GTGCTGACAT CGTCATCGGT
TCATCTCAGC GATTCGGCGT GCCCATGGGC TACGGTGGTC CGCACGCTGC CTTCTTGGCG
ACGACGCACG ACTGCAAGCG TTTGATGCCG GGCCGCATCA TCGGCGAGTC CATCGACGCC
GAAGGCAAGC CGGCGCTTCG CATGGCGATG CAAACGCGCG AGCAACACAT CCGTCGTGAC
AAGGCGACTT CGAACATTTG CACCGCGCAA GCGTTGTTGG CCAACATAGC TGCCATGTAC
GGTGTTTACC ACGGTCCGGA GGGCTTGAAG CAAATCGCCA AGCGCTCGCA CGACTTTGCC
GCCGTCTTCG CCGCCGGTGC CGAAAAGCTT GGCTTCAAGA ACACCACCCC GGAGTTCTTC
GACACCGTCA CGCTGAAGTG CCCGAGTGGC GCGGATGCCA TCGTCAAGGC GTGCGCGTCC
GCTGGCATCA ACATTCGCAA GATGGACGCC GACCACGTCT CTTTGGCGTT TGACGAAACC
ACAGAAATCG CCGACGTCGA CGCTCTCTTC AAGGTGTTCG CTGGTGGCGC TGCCGCGCCC
ACCGTCGCGC AAGTTGCGCC GTCTGTGAAC ACGACCATGC CGATGGCGCG TAAGTCTGAA
TTCATGACCC ACCCGGTGTT CAACCAGTAC CACAGTGAAC ACGAGATGGT GCGCTACCTC
AAGCGCTTGG AAGAGAAGGA TCTCTCCTTG GTTCACTCCA TGATCGCTCT CGGCTCTTGC
ACGATGAAGC TCAACGCAAC GACTGAAATG ATTCCGATCA CGTGGCCGGA GCTTGCGAAC
ATTCACCCGT TCGCGCCGAA AGATCAAACG CTTGGTTACC AAGAGATGTT CCGCGGTCTC
GAAAAGCAAC TCTGCGAGAT CACCGGCTTC GACGCCATGT CCCTCCAGCC GAACTCTGGT
GCGTCTGGTG AGTACGCTGG TTTGATGGGT ATCCGTGCCT ACCACCAATC TCGCGGTGAC
CACCACCGTG ACGTGTGCAT CATCCCGGTT TCCGCGCACG GTACCAACCC GGCGTCCGCC
GCGATGTGCG GCATGAAGAT CGTCGTCATT GGCACCGACG CCAAGGGTAA CATCAACGTC
GCCGAGCTCA AGGCTGCGGC CGAAAAGCAC TCCGCGAACT TGGCGGCTCT CATGGTTACG
TACCCGTCGA CGCACGGTGT CTACGAGGAA GACATCAAGG AAATTTGCGA AGTCATTCAC
CAACACGGCG GTCAAGTGTA CATGGACGGC GCCAACATGA ACGCCCAAGT CGGTTTGACT
TCTCCGGGTT TCATTGGTGC GGATGTGTGC CACTTGAACT TGCACAAGAC TTTCTGCATT
CCGCACGGTG GTGGTGGCCC GGGTATGGGC CCGATCGGTG TCAAGGCGCA CTTGGCGCCC
TTCATGCCGG ATCACCCGTC CATGAAGGAT GGTGCCGTCG CCGTCGGCGG GGACAAGCCC
TTCGGTGTCG TCGCGGCTGC CCCGTACGGA TCCGCGCTCA TTTTACCGAT TTCCTTCTCT
TACATCGCTA TGATGGGTTC CGAAGGTTTG GCGAACGCGT CTAAGCGCGC CATCTTGAAC
GCCAACTACA TGTCCAAGCG CTTGGAGGAT TACTACCCGG TGCTCTTCAG CGGCAAGAAC
GACACGTGCG CGCACGAGTT CATCCTCGAC ATGCGCCCGA TCAAGGATGC CACCGGCGTC
GAAGTCGCGG ACATCGCGAA GCGCTTGATG GATTACGGTT TCCACTCGCC GACGATGTCT
TGGCCGGTCG CCGGTACGTT GATGATTGAG CCGACCGAGT CCGAGTCCAA GGCGGAGCTC
GATCGATTCT GCGACGCTCT CATCGCGATT CGTGGTGAAA TCCGCGACAT TGAGGACGGT
AAGGTGGACC GCGAGAACAA CGTTCTCAAG AACGCCCCGC ACACCGCGGA GGTCGTCACC
GCGAAGGAGT GGAACCGCCC GTACCCGCGC GATCTCGGTG CGTTCCCGGT TGAATGGACT
CGCTCTCACA AGTTCTGGCC GCAAACCTCT CGCATCGACG ACGTCTACGG CGACAGAAAC
CTCGTCGCGA GCCGCGCGGC TGTGGAAGTC GCCGTCGCTC AAACCGCTTA AAAATCACAT
TTTGCACTCG TTAGGAGAAA TGTAATTCAT CACGCCTTAA TTCACTATTC TGACAAGCTA
AAAATTCTAA ATCAACCGCA AGTGTTCTTG TGCGTCGTCC CGGCGCCCAT CCGTCGGTGC
GTAAAACGTC CCCGCGGCTA ACGCCGAGGC CCACACCACC ACACACACGC ACGCCGCTAG
TTGTAAGTAC ATCGTGGACG AGCTATTCTC ATCCACTGAT GTGTCCTCTA CGTCAGAGTA
TTCCTCCAGA CCGGCGCGAC CGCCCTTGGT CCACGACTCG CCCTCGCCGT CTAAACCTTG
TGAGTCGT
|
|---|
| Protein sequence | MTSLIASGAR AVSTEALKPL DTFERRHNSG TTQEVAEMCA VIGFKDIDAL IDATVPENIR
LKKTMDMGEY TQPLTESEFL TMMKNMASKN KVFKNYIGTG YHGTHVPTVI LRNILENPGW
YTQYTPYQAE ASQGRLESLL NFQTMITDLT GMPLSNSSLL DEGTAAAEAM TMCSALNRGK
KPKFYVSNKC HPQTIAVVQT RAEGLGLEAV VGDENSFDYT AKDVCGVLVQ YPATDGSIID
YKPIVSQAQA NGIRVVAAAD LLSLTMLQPP GEWGADIVIG SSQRFGVPMG YGGPHAAFLA
TTHDCKRLMP GRIIGESIDA EGKPALRMAM QTREQHIRRD KATSNICTAQ ALLANIAAMY
GVYHGPEGLK QIAKRSHDFA AVFAAGAEKL GFKNTTPEFF DTVTLKCPSG ADAIVKACAS
AGINIRKMDA DHVSLAFDET TEIADVDALF KVFAGGAAAP TVAQVAPSVN TTMPMARKSE
FMTHPVFNQY HSEHEMVRYL KRLEEKDLSL VHSMIALGSC TMKLNATTEM IPITWPELAN
IHPFAPKDQT LGYQEMFRGL EKQLCEITGF DAMSLQPNSG ASGEYAGLMG IRAYHQSRGD
HHRDVCIIPV SAHGTNPASA AMCGMKIVVI GTDAKGNINV AELKAAAEKH SANLAALMVT
YPSTHGVYEE DIKEICEVIH QHGGQVYMDG ANMNAQVGLT SPGFIGADVC HLNLHKTFCI
PHGGGGPGMG PIGVKAHLAP FMPDHPSMKD GAVAVGGDKP FGVVAAAPYG SALILPISFS
YIAMMGSEGL ANASKRAILN ANYMSKRLED YYPVLFSGKN DTCAHEFILD MRPIKDATGV
EVADIAKRLM DYGFHSPTMS WPVAGTLMIE PTESESKAEL DRFCDALIAI RGEIRDIEDG
KVDRENNVLK NAPHTAEVVT AKEWNRPYPR DLGAFPVEWT RSHKFWPQTS RIDDVYGDRN
LVASRAAVEV AVAQTA
|
|---|
| |