Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_25908 |
Symbol | |
ID | 5006844 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009375 |
Strand | + |
Start bp | 16921 |
End bp | 18949 |
Gene Length | 2029 bp |
Protein Length | 553 aa |
Translation table | |
GC content | 58% |
IMG OID | 640422265 |
Product | predicted protein |
Protein accession | XP_001422786 |
Protein GI | 145357153 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02344] T-complex protein 1, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GATCGCGCGT CCGCGCCCGC ACGACCACGC GCGATGATGC AACAGGGCGG TCAAGGGCAA CAAATCATGG TGATGAACAC CAACGCCAAG CGCGAGACGG GTTCGATCGC GCGCGCGAAC AACATCGCGG CGGCCAAGGC GGTGAGCGAC ATCATCCGCA CGACGCTCGG GCCGAGGTCG ATGTTGAAGA TGATTTTAGA CGCTTCGGGA GGTACGACGA CGACGACGAC GACGACGACG ACGACGACGC ATATCGCGTC TTCGCGCGAG TCCACGCGTC TCGCGCGCGG CGCGCGCGCG ATCGATGAAA CGCGGAGCGA CAGAGTCAAC GCGGCGAAAA GTCAACGCGA GCGAACGAAC GAACGAACGC GGTTCGACGG TGACGGGACG CACGAACGCG GCTGAACGAG GACGCGAGCG TTGACGCGAG CGTGATCAGC GCTCGCTGAT GGTCGAACGT CCGAGCGCGA TGGCGATCGG CGTCGGATGG TGATTGGATG TTTTGGACGG GTGACTGACC TCGCGCGCGT TTTGCTCAAA CGCAGGCATC GTGTTGACGA ATGACGGGAA TGCGATTTTG AGAGAGATCG ACGTCACGCA TCCGGCGGCG AAGAGTATGA TTGAACTGTC GCGCACGCAA GACGAAGAAA CCGGGGACGG GACGACGTCG GTGATTATTC TGGCTGGTGA AATCCTTCAT CTGTCGCAAC AGTTTTTGGA AAAGAACATT CACCCGACAG TCATCGTGAG GGCGTACATG AAGGCGTTGG ACGCCGCATT GAAAGTGATT GATTCAATTA GTTTTCCCAT CGATGTCACG AATCGTGATG AGATGATGAA GATCGTCAAG AGCTCTGTCG GCACCAAGTT TACCGCGCGC ATGGGCGAAC TCATTCCAAA CTTGGCGCTC GACGCGGTCA TGTGCGTGGC TCGCAAAAAC GCCGACGGCA CGAACGACAT AGACATTAAA AAGTACGCCA AGGTGGAGAA GATTGCGGGT GGTTCTATCG ATGACTGCAC GGTGCTACGA GGAGTGATGA TGAACAAAGA CGTCGTCGCG CCTGGACGAA TGAAGCGACG AATTGAAAAC CCGAGAATCA TGCTTCTCGA CTGCCCATTG GAGTACAAAA AGGGCGAGAA CCAAACCAAT GTGGAAATCA CCAAGGAAGA AGATTGGGCG GTGTTGCTGA AGATGGAGGA GGATTGGATC AAAGAGACGT GCGCGAAGAT CGCGGCTTTC AAGCCCGATG TCGTCGTCAC CGAAAAGGGA TGCAGTGATT TGGCTTGCCA CTACCTTTCC AAGGCGGGCA TCACCGCATT GCGACGCGTC CGCAAGACCG ATAATAATCG CATCGCGCGA GCCGCGGGGG CCACCGTCGT TTCTCGCGTG GATGAGCTTC GTGAATCAGA CATCGGCACC GGTGCTGGTT TGTTCAACGT CGAGAAAATC GGTGACGAAT ATTTCACCTT CGTCGTCGAC TGCAAAGAGC CCAAGGCGTG CACCGTCGTC CTTCGCGGCG CGAGCAAGGA TATTTTGAAT GAAATTGAAC GCAACTTGAT TGACGCGATG GGCGTAGCGA GGAATGTCGT CCAAGACCCG CGACTGTTGC CCGGTGGCGG TGCGGTCGAA ATGGCTGTCT CTCGCGCGAT CGCGGAAGAA GCGACGAAGA TCGAGGGTGT GGAGCAATGG CCGTTCCGCG CCATCGGCGC GGCACTCGAG GTCATTCCGC GAACGCTCGC GCAAAACTGC GGCGCCAACG TCATTCGCAC TCTCACCAAA CTTCGCGCCA AACACGCCGA GGGCGAAGAA GCGCGAACGT TCGGTATTGA TGGCGATAAG GGCACGATCG TAGACATGAA AGAGCTCGGT GTGTGGGATC CGTACGCGGT CAAGGTGCAA TCCATCAAAA CCGCCGTCGA GAGCGCCACG ATGCTATTGC GCATTGATGA CATCGTCTCC GGGCTTTCCC AAAAGAACTC CGACGCGGCG GGCACGGGCA CGGGCGTCAG CGCGGGCGAC GACGACTAA
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Protein sequence | MMQQGGQGQQ IMVMNTNAKR ETGSIARANN IAAAKAVSDI IRTTLGPRSM LKMILDASGG IVLTNDGNAI LREIDVTHPA AKSMIELSRT QDEETGDGTT SVIILAGEIL HLSQQFLEKN IHPTVIVRAY MKALDAALKV IDSISFPIDV TNRDEMMKIV KSSVGTKFTA RMGELIPNLA LDAVMCVARK NADGTNDIDI KKYAKVEKIA GGSIDDCTVL RGVMMNKDVV APGRMKRRIE NPRIMLLDCP LEYKKGENQT NVEITKEEDW AVLLKMEEDW IKETCAKIAA FKPDVVVTEK GCSDLACHYL SKAGITALRR VRKTDNNRIA RAAGATVVSR VDELRESDIG TGAGLFNVEK IGDEYFTFVV DCKEPKACTV VLRGASKDIL NEIERNLIDA MGVARNVVQD PRLLPGGGAV EMAVSRAIAE EATKIEGVEQ WPFRAIGAAL EVIPRTLAQN CGANVIRTLT KLRAKHAEGE EARTFGIDGD KGTIVDMKEL GVWDPYAVKV QSIKTAVESA TMLLRIDDIV SGLSQKNSDA AGTGTGVSAG DDD
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