| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25826 |
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| Symbol | PAFD3501 |
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| ID | 5006528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009374 |
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| Strand | - |
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| Start bp | 63860 |
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| End bp | 65666 |
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| Gene Length | 1807 bp |
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| Protein Length | 576 aa |
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| Translation table | |
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| GC content | 61% |
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| IMG OID | 640421949 |
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| Product | predicted protein |
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| Protein accession | XP_001422642 |
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| Protein GI | 145356861 |
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| COG category | [K] Transcription |
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| COG ID | [COG5296] Transcription factor involved in TATA site selection and in elongation by RNA polymerase II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGGGATTCCG GCGCGCGACG TTCCGGCGTT CCGCGTCACG ACGCGTCACG ACGCGACCTT
CGACGCCCTC CTCGCGATGG CGTCCGACGA CGAAGCGCGC GATGACGACG ATTTCGACGT
CCTCGCCGCG GCCGGGAGCT CCGACGACGA CGCCGACGCC GACGATTTCG ACGATGGGTA
CGGATCAGAT TTGATGGGCG ACGCCGCCGA TCGCGCGCGC CTCGCGTCGT TGAACGAACT
CGAGCGGGAA GAGATCATGC TCGAACGCGC GGACGCGCGA AAGAGGCTGG AATCGCGACG
CGCGATCATC GCGGCGGCGC GATCGAAGGA ATTGGAGCTG GCTCGGAAGA AGACGGGGGC
GCGGGCGATT TCGAGTAAAC AGCGGGACGA GTTAGAGGCG CTCGAACGCA TCGCGGAGGC
GAAGAAACGA AAAGAACGCA GTCGACGCGT GTTCGGTGAT CTGAGCGAGG ACGAGGAAGA
ATTTGGCGGG GCAGCCTCCG AATCGGAAGA CAAAGAAAGG GTCGCGAGAC CTCGGCGGAA
GAAACGCGAA ACCCGAGCGG ACGTCGATCT TGAGGCTGAA TACGCGTCGT CCGACGTTCC
GGCGACGCGC GATGAGATCG CGTCGGTGAC GGTGAAGAGA CATCAGCTCG AGCAGTGGGT
GAACGAACCG TACTTTGAAG CCGCGGTGAC GAATTGTTTG ACGCGCGTCG GCATAGGACT
CAACAAGGAA GGGCAAAACG TCTATCGCCT CGTCGAGATC GCGGGCGTCG CGGACGGCAA
GTACAAGCAA TACTCGCTCA AAAAGTACGA GTACTTGGCC AACAAACCGC CGACGCAAAA
GTGGTTGATT TTGCGCTGGG GAAAGTCTGA AAAGACGTTT CGACTGAGCG AGGTTTCAAA
CTCCGACGTG CAAGACGCCG AGTGGAAAGC CTGGGTGGCG CACTGCGCGC AGGCGGGGTG
CACCCCCATC ACCGCGCGCG ATGTGAAGAA GTGTCTTCAA GGGTTGGAAG AGGCGAAAAA
TTACCGATAC ACGAGCGACG ACGTGACGAA GATTCTCGCG GAGAAGCGCG AAAAGCAAGG
GACGCGTCAC AACTTATTGT TTGAAAAGGA GCAAATCAAG GCGGCGATCG CGCACGCCGA
GGCGGAAAAC GATTTAGATA AAGTTGAAGA GCTTCGTCAA CGTTTCGACG AGGTCGATCG
AGAGATAAAG GACAAATTGC AGCAGAGAAG CGGGTCGACG CAGGACGCCC TCGCGAACAT
CAACCGCCGC AACGAAATCC AAAACAGCGA AAAGCTCTCG AAGCGAGCGT CCGAGCAAGT
GGCGAAACTC AAGGCGGGCG TGTTGAACAC GGGCTCAGGC GATCCATTCA GTCGTCGCCC
GACGCGTTTG ACGACGTATT GGGACATGGG CGCGGGCGCC GCCGAGCGAT CGGCGACGGC
GGCGGAAGAA GAAGAAGCCG CGGCGGCGAC CGCCGCGGCG CTGGCGACCG ATGGTGGAGA
CGAAGAAGAC GACATCTTTC TCACCGCGGG TGTGGACGCG CAGCAAAGCG AAAAAGAACT
CGTAGACGTG CTTCAGCAGG CGCACCGCGA AACCGTCGGC TCGCTCAACA TCGATCTCAG
TCGACTCGAC GCGCCCGCGG ACGCGGACGC CCTCAGGCTC AAGACGACGA AGAGTGTGCT
CGATCGCGGT GCCGTACTTT TGAAATCCGC CTACGACGCT CAACGCGCCG AGCAGCTCGC
GACGCAACCG CCCGGTAAGG CTTTCACCGT CGCCGAATAC TTGGCCGAAT TCGTGGCGCC
GACGTGA
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| Protein sequence | MASDDEARDD DDFDVLAAAG SSDDDADADD FDDGYGSDLM GDAADRARLA SLNELEREEI
MLERADARKR LESRRAIIAA ARSKELELAR KKTGARAISS KQRDELEALE RIAEAKKRKE
RSRRVFGDLS EDEEEFGGAA SESEDKERVA RPRRKKRETR ADVDLEAEYA SSDVPATRDE
IASVTVKRHQ LEQWVNEPYF EAAVTNCLTR VGIGLNKEGQ NVYRLVEIAG VADGKYKQYS
LKKYEYLANK PPTQKWLILR WGKSEKTFRL SEVSNSDVQD AEWKAWVAHC AQAGCTPITA
RDVKKCLQGL EEAKNYRYTS DDVTKILAEK REKQGTRHNL LFEKEQIKAA IAHAEAENDL
DKVEELRQRF DEVDREIKDK LQQRSGSTQD ALANINRRNE IQNSEKLSKR ASEQVAKLKA
GVLNTGSGDP FSRRPTRLTT YWDMGAGAAE RSATAAEEEE AAAATAAALA TDGGDEEDDI
FLTAGVDAQQ SEKELVDVLQ QAHRETVGSL NIDLSRLDAP ADADALRLKT TKSVLDRGAV
LLKSAYDAQR AEQLATQPPG KAFTVAEYLA EFVAPT
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