Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_2019 |
Symbol | |
ID | 5006082 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009370 |
Strand | - |
Start bp | 341355 |
End bp | 344042 |
Gene Length | 2688 bp |
Protein Length | 877 aa |
Translation table | |
GC content | 56% |
IMG OID | 640421503 |
Product | predicted protein |
Protein accession | XP_001422042 |
Protein GI | 145355591 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases [COG2907] Predicted NAD/FAD-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0204163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | CGCGTCGCCG TCATCGGCGG CGGCGTCAGC GGCCTGTCGG CGGCGTATTT ACTCCAAAAG AACGCCGACG ACGCCGGCGG CGGACCAAAA AGTGTAAAAG CGCAAAGCGC GCCCTCGACG CCCTCGTGCG GCGCGGTGAC GCTGTTCGAA GCGTCGACGA AGCTCGGTGG ACACGCACTG ACGCAATACT CGAGCACGGC GAAGTGCGAC GTGGATTTGG GCTTCCAGGT GTTCAACCTG ACGACGTACC CGCACCTGGT GGGCCTGTTC GGCGAGCTCG GCGTCGAGAG CGAACCGAGC GACATGTCGT TTTCATTGTC CACGGGAGAC GTCGAGTGGG GGAGCATAGG ACTGAAAGGC GTGTTCGCGC AAAAGTCGAA CGCGATGAGC GGACGGTTTT TGAATATGAT TCGGGAGATT CTACGTTTTG GTCGCGAGGC GCCAGAGGTT TTGGCGCCGG AACGCGCGAG CGAGTTCGCG GACGTCTCTT TGGGTGAGTA CCTCAAAGCT CGCAAGTACT CGGCGTTCTT TCAAGAGTCG TACGTGGTGC CGATGTGTGC GGCGATTTGG AGCTGCAGCG ACGACGACGC GATGGCGTTC CCAGTGCGCA CGCTCGTACG ATTTTGGGTG AACCATCACT TATTAAACAT CATCGAGCGA CCTCTCTGGC GAGTCGTCAG TGGTCGATCG AGCGCTTACG TCGACGCCGT TGAGCGCGAG CTCAAAGACG TGCGTAAGGG CGCGTACGTG ACCAAGGTGT ACCGCGTGGC GGGGGGCGTG AGCGTGACTT TTAAGACAGA GGACGCCAAG GGAAAAGTTC AGGAGTCCAC CGAGGTTTTC GACGACGTCG TTTTCGCGTG CCATAGCGAT CAAGCGTTAC AAATACTTGG CAAAGCTGCG AGCGAGGAAG AAGTCTCGGC TCTGTCGGCG GTGAAGTATC AAGAGAATGA CGTGTATTTG CACACCGACG AAACAATGAT GCCGCGGAAC AAAGATGCCT GGGCATCGTG GAACTGCCTT CGCGGCGATC GCTTAGGCAT TCCCGCCGAA GAAGCCGCAA ATCGAAGCGT TTGTGTGACT TACTGGGTCA ACTTGTTGCA AAACCTCGCC CCTGGGACGA AGGATTTGTT CGTCACGCTG AACCCGCCGC GCGAGCCGAA GGCAGGCTCG GTCGAACACA AAGTCACGCT CGCGCATCCG TTATTTAACA AAGCCGCGAT CGCGGCGCAG GAGGAGATCA AGGCGTTACA AGGTAAAGAC CGGGTTTGGT TTTGCGGCGC GTGGTGCGGC TACGGATTTC ACGAGGATGG TATCAAATCA GCGGTTGATT GTGTGGACAA AATGCTCGGC AAGTCATCCG TGCCGTGGAT GCCGCGGTCG TGCGATCCAA AGTTGTCCAT GAGCACGAAG ATGGTCTTAC CGCTTTTCCA GCGCGCGTGC GTGGGGTGGT TACCAGCCGA CAAACGACTC CGCATGATTT TACCGGATGG AAGCGAACGT CTTATGATGG GTAAAGAGGC CAACGCGTCG TCGGAGACGA TTACCATGAC GGTATTCAAC CAAAGACTCT TCATGCAAAC GATTTTGCGC GCAGATATCG GTCTTGGTGA GTGTTATATG AACGGAGATT TCGACGTGGA TTTAATTGGG TTCATGGACA TGATTTGCAA AGGCCATCCC GCGGCTTCTG GCGCAGAGAC GGAGAGCTGT AAGCCGAAGA TGCGTCTCGA CCCAGTGGGT CTCCTCACGG AGGCGGTTAA CTGGGTAGGA GCGCAAATGG AGATGGCAGC ACACAAGGCG TTAAGTAACA CGAAAGAAGG ATCTCGTAAA AACATAGAGT ACCACTACGA CGCTGGAAAC GAGTTCTACA AGCTGTTTTT GGATGACACC ATGTTGTACT CGAGCGCCAT TCACGGCGCT ATCGACGACG CTGCGATGTC CGTAGACGTT TTGAAGAAGT TCAAGACGTT CGAGGCCCAA GAAAAGCACT TGGAAGAGGC GCAGTATTTA AAGATAGACG CCATGATCGC TCGAGCGGGT ATTAAGCCAG GCGATCGCGT GCTTGAGATT GGCTGCGGTT GGGGGACGTG CGCGATTCGC ATGGCGAGCG AGAAGAATTG CCATGTCACT GGTTTGACAC TGTCGCACGA GCAGCACGCC GAAGCAACGG CGCGCGTCAA AGCCGCCGGT TTGTCACACT TGATCGACAT CGTCATTTGT GACTACCGCG ATGTGCAAGG AACGTTCGAC AAGGTGGTGT CGATTGAAAT GCTTGAGGCG GTCGGACACG AACACTTGCC GACGTTCTTT GGCACCGTGC ACAGAGTGCT GAAACCCGGC GGGCGAGCCG CGATCCAAGT CATCACTATG CCGGACGGCC GCTACGAGTC ATACTGCAAC AGTGAAAGCG ACTTCATTCG TGCGTACATT TTCCCAGGTG GCCACTTGCC GTCGGTGGGG GCGATGAAGA GCGCTTCGCC GCGTGGTCTC GTGCTCGAGG GATACGACGA TATCGGCTTG CATTATGCCG TCACTTTGCG ATTGTGGCGC GAGCGTATGA TGCATCACGC CCAACGAATC CTTTCTATGG GCTACTCACG AAAGTTTTTG CGCATGTTTG AGTTTTACTT TGCGTATTGC GAGGCTGCGT TTGCGAACAA GTTGATTTAC GATTTGCAAA TGACGTGG
|
Protein sequence | RVAVIGGGVS GLSAAYLLQK NADDAGGGPK SVKAQSAPST PSCGAVTLFE ASTKLGGHAL TQYSSTAKCD VDLGFQVFNL TTYPHLVGLF GELGVESEPS DMSFSLSTGD VEWGSIGLKG VFAQKSNAMS GRFLNMIREI LRFGREAPEV LAPERASEFA DVSLGEYLKA RKYSAFFQES YVVPMCAAIW SCSDDDAMAF PVRTLVRFWV NHHLLNIIER PLWRVVSGRS SAYVDAVERE LKDVRKGAYV TKVYRVAGGV SVTFKTEDAK GKVQESTEVF DDVVFACHSD QALQILGKAA SEEEVSALSA VKYQENDVYL HTDETMMPRN KDAWASWNCL RGDRLGIPAE EAANRSVCVT YWVNLLQNLA PGTKDLFVTL NPPREPKAGS VEHKVTLAHP LFNKAAIAAQ EEIKALQGKD RVWFCGAWCG YGFHEDGIKS AVDCVDKMLG KSSVPWMPRS CDPKLSMSTK MVLPLFQRAC VGWLPADKRL RMILPDGSER LMMGKEANAS SETITMTVFN QRLFMQTILR ADIGLGECYM NGDFDVDLIG FMDMICKGHP AASGAETESC KPKMRLDPVG LLTEAVNWVG AQMEMAAHKA LSNTKEGSRK NIEYHYDAGN EFYKLFLDDT MLYSSAIHGA IDDAAMSAQY LKIDAMIARA GIKPGDRVLE IGCGWGTCAI RMASEKNCHV TGLTLSHEQH AEATARVKAA GLSHLIDIVI CDYRDVQGTF DKVVSIEMLE AVGHEHLPTF FGTVHRVLKP GGRAAIQVIT MPDGRYESYC NSESDFIRAY IFPGGHLPSV GAMKSASPRG LVLEGYDDIG LHYAVTLRLW RERMMHHAQR ILSMGYSRKF LRMFEFYFAY CEAAFANKLI YDLQMTW
|
| |