Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_19857 |
Symbol | HSP90B |
ID | 5005969 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009370 |
Strand | + |
Start bp | 13119 |
End bp | 15697 |
Gene Length | 2579 bp |
Protein Length | 794 aa |
Translation table | |
GC content | 57% |
IMG OID | 640421390 |
Product | Heat Shock Protein 90, endoplasmic reticulum |
Protein accession | XP_001421809 |
Protein GI | 145355105 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.768315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | CACCGCGACG CGACCGAGCG AAGATGGCGC GCGCGCGAGG TCGCGCGACG CGATGGACGA CGATCGCGCT CGCGTGCGTC GTGAGCGCGA TGTGCGTGTT CGGAGGCGCG ACGAACGGTG CGTGGACGGA AAGATGAGCG AACGATGCGC GAAAGAAAGA TGTCGACGAA GCTCGACGAA GATTTCCGAC CGCGCGCGCG ATCGAGTCGC GACGCGCGGG CGGCGCGGCG CGAGCGAGCG CGAGATGCGT GAACGATGAC TGACCGAGCG CACACGTCGA CGACGCAGTG CGCGCGGAGG AAGACGCGAC GACGGACGCC GGCGCGGCGA AAATCCCAGA CTTCGCCCCG GGGGCGGAAA AGTTTGAGTT CCAGGCCGAG GTCTCGCGAT TGATGGACAT CATCATCAAC TCGCTGTACT CGAACAAGGA TATTTTCTTG CGCGAATTGA TCTCGAACGG CTCGGATTCT TTGGACAAGA TTCGATTCAT GTCGCTCACC GACAAGGAGC AATTGGGAGG CGGCGAAAAC GCCGATCTCG ACATTCGCAT CAAGGCTGAC AAGGAGCGCA AGGTGCTCAC GATTCGCGAC CGAGGCATCG GGATGACGAA GGACGACTTG ATGAACAACC TCGGTACGAT CGCCAAGTCC GGAACGTCCG CGTTTTTGGA CCAAATGGCG TCTGGCGGCG ACATGTCTTT GATCGGACAG TTCGGCGTCG GTTTCTACTC CGTCTACCTC GTCGCCGACT TTGTCGAAGT GCGCTCGAAA CACAACGACG ACGACAAGCA ATGGGTGTGG CAATCTAAGG CTGATGGCAA CTTTGCCATC TCCGAGGACG AAGGCGAACC GCTCGGCCGC GGGGTGGAGA TCAACATCTA CCTCAAGGAA GAAGCGCAAG AGTACCTCGA AGAGACCAAG CTTCAAGCTC TCGTCGAGCG TTACTCCGAG TTCATCAACT TCCCCATCTA CCTGTACAAC TCCAAGGAAG TCTCTGAAGA AGTACCCGTC GAAGCCGGCG ACGAGGATGA AGAAGCTGAC GTCTCCGGTG ACGACGCCGA AGACGACGAG GAAGGCGACG ATGAGGAAGG CGACGAAGAC GAAGAGGACG ACGAACCGAA GACGAAGACC GTGACCAAGA CCGTTTGGGA TTGGGAACGC CTGAACGACG TCAAGGCGAT CTGGCTCCGA AGCACGAACG AAGTTGAAGA GGAAGAGTAC ACCAAGTTCT ACCAAGCTCT CGCCAAGAAC TCTGAAGAGC CGCTCGCGTA TTCGCACTTC AAGGCGGAGG GCGACGTCGA ATTCAAGGCC ATTCTCTACA TCCCCGAACG ACCGTCGCCG GACTACTACG ACAACTACTA CAGCCGCGCG AGCGCGCTCA AGTTGTACGT CCGCCGTGTC TTCATCTCTG ACGAGTTCGA CGAGTTGTTG CCCAAGTATT TGAGCTTCAT TAAGGGCATC GTCGACTCGG ACACGCTCCC CTTGAACGTG TCTCGCGAAA CTCTCCAGCA ACACACGAGC TTGAAGACGA TCAAGAAGAA GCTCGTTCGC AAGGCGCTCG ACATGATTCG CAAGCTCGCG GAAGAAGGCG GCGATGCGGA AGATGACGAT GCCAAGCCCG AAGGCGAAGA TGACGCGGCG ACGAAGGACG AGCCGAAGTA TGAAAAGTTC TGGAAGTCGT TCGGCAAGGC GATCAAGCTC GGGATCATCG AAGACGCGAG CAACCGCGTG CGCCTCGCCA AGCTTCTTCG ATTCCAAACC TCGAAGTCCG ACGGCAAGCT CGTCTCTTTG GAGCAGTACG TCGAACGCAT GAAGGAGGGC CAAAAGTCGA TTTATTACAT CACCGGAGAA TCCATCGACG CGCTCAAAAA CTCTCCGTTC CTCGAGAAGC TCATCTCCAA GGACTTCGAA GTCATCTACT TCACCGATCC CATCGATGAG TACACCATGC AAAACTTGAC TGAATTCGAT GATTTCAAGT TCTCCAACGC GAGCAAGGAA GACCTCAAGT TTGGCGACGC GGACGACGAC GAAAAGGCTC GCTTTAAGAA GACGAAGGAG GCGTTCAAGT CTTTCACCAC GTGGTGGAAG AGCAAGCTTC CGGACACCAT GATTGAAGCG GTCAAGGTCT CCAACCGCCT CTCCACCACC CCGTGCGTCG TCGTGTCGTC CAAGTACGGC TGGTCCGCAA ACATGGAACG CATCATGAAG GCGCAAGCCA TGGGCGACGA ATCCCGTCAC GAGTACATGC GCGGCAAGAA GACGCTCGAA GTGAACCCGA GACACCCGAT GATCGCGGCG CTCAAGGAAC GCGCGGCTAC GGATCCGGAC TCCGAAGAAA CGGAAACGTT GGCCAAGCTC ATGTTCGAAA CCGCGATGTT GGAATCTGGT TTCTCGTTCG ACAAGCCTCA AGAGTACACC TCTCGCGTTT TCGACTTGTT GAAGTCGAAC ATGGGCATCG AAAAGGATGC CGAACTCGTC GACGAGACCC AGTTCCACTT GCCGGAAGAA GAAGACGAGG AAGATAAAAA GGAAGAAACC AAGGAAGAAA CCAAGGAAGC TCCGAAAGAC GAGCTCTAA
|
Protein sequence | MARARGRATR WTTIALACVV SAMCVFGGAT NVRAEEDATT DAGAAKIPDF APGAEKFEFQ AEVSRLMDII INSLYSNKDI FLRELISNGS DSLDKIRFMS LTDKEQLGGG ENADLDIRIK ADKERKVLTI RDRGIGMTKD DLMNNLGTIA KSGTSAFLDQ MASGGDMSLI GQFGVGFYSV YLVADFVEVR SKHNDDDKQW VWQSKADGNF AISEDEGEPL GRGVEINIYL KEEAQEYLEE TKLQALVERY SEFINFPIYL YNSKEVSEEV PVEAGDEDEE ADVSGDDAED DEEGDDEEGD EDEEDDEPKT KTVTKTVWDW ERLNDVKAIW LRSTNEVEEE EYTKFYQALA KNSEEPLAYS HFKAEGDVEF KAILYIPERP SPDYYDNYYS RASALKLYVR RVFISDEFDE LLPKYLSFIK GIVDSDTLPL NVSRETLQQH TSLKTIKKKL VRKALDMIRK LAEEGGDAED DDAKPEGEDD AATKDEPKYE KFWKSFGKAI KLGIIEDASN RVRLAKLLRF QTSKSDGKLV SLEQYVERMK EGQKSIYYIT GESIDALKNS PFLEKLISKD FEVIYFTDPI DEYTMQNLTE FDDFKFSNAS KEDLKFGDAD DDEKARFKKT KEAFKSFTTW WKSKLPDTMI EAVKVSNRLS TTPCVVVSSK YGWSANMERI MKAQAMGDES RHEYMRGKKT LEVNPRHPMI AALKERAATD PDSEETETLA KLMFETAMLE SGFSFDKPQE YTSRVFDLLK SNMGIEKDAE LVDETQFHLP EEEDEEDKKE ETKEETKEAP KDEL
|
| |