| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_19031 |
|---|
| Symbol | |
|---|
| ID | 5006601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009374 |
|---|
| Strand | - |
|---|
| Start bp | 284620 |
|---|
| End bp | 285237 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640422022 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422703 |
|---|
| Protein GI | 145356985 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5208] CCAAT-binding factor, subunit C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.227098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0123059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG ACACCGAAAA GGCGTACGAG GCCGCGGTGG CGGCGGCGGT GGCGCGGGGT
GAGGTGCCGG AGGAGAAGAC GGCGGACGTC GACGGTAAAC CGGCGGAGAA CGACACGGTT
TTGCCCGTGG CGCGCGTGAA ACGAATCATC AAGCTCGATA AGGATGTCAA GCAAGCGTCA
GCGGATGCGA TTAAGTGCGT GACGAAGGCG ACGGAGCTGT TTTTAGAGGG CTTAGCCGTC
GGTTCACACG CGGGCATGCG CGCGGCGAAG AGAAAAGGCG TGCAGTACAA GGATTTGGAG
AGCTTCGTCT TGCGACGGGG CAAGTATGAA TTTTTACACG ATCACGTGTG GGCGATGCGG
CCGCGAGAGG GAGAGAAGGG TGATGACGAT GACGATGATG ATGACGACGA TGACGACGAC
GACGCGCCGT CCGCGAAGAA GGCGAAAAAG TTGGCGGACG CCAACGGTTC GAGACGAGTG
ACAGAATTTT TCAAACCTGG CGAGTCGCCG ACGAAGAAGC CCGCGAACGA CGAGGACGAA
ATTGTCATCG ACGCGGCGCC GACGCAGACA CAAACGGCAG CCGCTGTGAT CCCCGAGACA
GAAATTCAGA CGCAATAG
|
|---|
| Protein sequence | MKEDTEKAYE AAVAAAVARG EVPEEKTADV DGKPAENDTV LPVARVKRII KLDKDVKQAS
ADAIKCVTKA TELFLEGLAV GSHAGMRAAK RKGVQYKDLE SFVLRRGKYE FLHDHVWAMR
PREGEKGDDD DDDDDDDDDD DAPSAKKAKK LADANGSRRV TEFFKPGESP TKKPANDEDE
IVIDAAPTQT QTAAAVIPET EIQTQ
|
|---|
| |