Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_19001 |
Symbol | |
ID | 5006577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009374 |
Strand | + |
Start bp | 203133 |
End bp | 204131 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | |
GC content | 63% |
IMG OID | 640421998 |
Product | predicted protein |
Protein accession | XP_001422519 |
Protein GI | 145356607 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.424029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00246987 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCGTC CGCGCGTGCT CTTTTGCGGT CTAGAATTCG AAGACGGCTA CGCCCACACG CGCGCGTACG TCGACGACAA CGATCTCGAC GTGGACGTCG CGCGATGCGC GCGCGAGGAC GTCGCGCGCG AGATCTCGCG CTGCGATGTC GCCGTTCCGC TCATGACGAA ACTCGACGCC GAGCTGTTGA AAATCGGCGC CGCCGGCGCG CTGACGCACG TCCTGCAGTT CGGCGTCGGG TTAGAGGGCG TGGACATCGA GTGCGCGACC GCGCTGGGCG TCACCGTGGC GCGGATCCCT TCGGAGAAGA CGGGGAACGC GACGAGCACG GCGGAGCTCG CGGTGTACTT GGTCCTGGCG GCGCTGCGAC GTCACGACGC CATGTCGGCG AGCGTGCGGA GTCGTAAACT CGGCGCGCCG ACGGGGAACG CGCTGAGCGA GTGCGAGGTG ATGATACTGG GATGGGGGGC GATCGGGGTG AAGATTGCGG CGCGATTGCG CGGATTTGAG TGCGCGTTGA CGGCGGCGCG TAAATCAAAG TGGGCCGAGG ACGAGAGCGA TCGATGTGGG ATACCGTTGC GAGCGGTGTG CGGGACGAGC GACCGGGATG GATTGCGTGC GCTGTTGCGC GCGGCGGACG TGGTGTGCGT CGCGTGCACG CAAGATCCGT CGAACGCCGG GATGATCGAC GACGAGTTTT TGGCGGCGAT GAAGCCGGGC GCGGCGTTGG TGAACATCGC GAGAGGGGGC TTGTTCGATC GCGACGCCGT GTTGAAAAGC TTGAAAAGTG GGCATTTGGG TTATTTAGCG AGCGATGTGG CGTGGAGTGA ACCTGTCGAT CCCGAGGATC CGATCGTTCG GCACGAGCAC ACGTACTTCA CGCCTCACAT CGCCGGAGTG ACGCACTCGA GCTATAGAAT GATGGGGGAA ATAGTCGCGA CTAGCGCGTC TCGCTTGGTC GAGTTTAGGA AATTAACCGA TATACAGGTT GTGAATTAA
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Protein sequence | MRRPRVLFCG LEFEDGYAHT RAYVDDNDLD VDVARCARED VAREISRCDV AVPLMTKLDA ELLKIGAAGA LTHVLQFGVG LEGVDIECAT ALGVTVARIP SEKTGNATST AELAVYLVLA ALRRHDAMSA SVRSRKLGAP TGNALSECEV MILGWGAIGV KIAARLRGFE CALTAARKSK WAEDESDRCG IPLRAVCGTS DRDGLRALLR AADVVCVACT QDPSNAGMID DEFLAAMKPG AALVNIARGG LFDRDAVLKS LKSGHLGYLA SDVAWSEPVD PEDPIVRHEH TYFTPHIAGV THSSYRMMGE IVATSASRLV EFRKLTDIQV VN
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