Gene OSTLU_18526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_18526 
SymbolRPS4 
ID5006046 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009370 
Strand
Start bp210598 
End bp211643 
Gene Length1046 bp 
Protein Length253 aa 
Translation table 
GC content60% 
IMG OID640421467 
ProductRibosomal protein S4, component of cytosolic 80S ribosome and 40S small subunit 
Protein accessionXP_001421876 
Protein GI145355247 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1471] Ribosomal protein S4E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0163807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.488363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTG GCCTCAAAAA GCATTTGAAG CGTCTCAATG CGCCCAAGCA CTGGATGCTC 
GACAAGCTCG GCGGCGTCTT CGCCCCGAAA CCGTCGCCCG GTGCGTGTCG CGCGAAGGGT
TTCGCGCGCG CGGGACGATG GGCGACGCGC GCGCCTCGCG AGCGCGCGAT GACGCGCGAT
CGAGATCGCG ATCGACGCGA GCGATATCTC GTCGACCGTC ACTGACCGTT CGTTCGACGT
CGCGATCGCG CGCAGGTCCG CACAAGTCGC GCGAGTGCTT GCCGCTGTGC CTCATCCTTC
GCAACCGCTT GAAGTACGCG CTGACGTACA AGGAAGTGAC GACGATTCTC ATGCAGCGCG
TGGTGAAGGT GGACGGGAAG ATTCGCATGG ATAAGTGCTA CCCGTGCGGG ATCATGGGTG
CGTGGATCGA GGCGACGCGA CGCGAACGAC GCGCGAATTT CAGCGATCTC GACTCTTGGC
TTAGGGCTTG CGCGACGCGC GAGACGCCGG ACGACTGACG AAGGACGACG ACTTTGACTT
TGACAGACGT CGTGAGCATC GAAAAGAGCG ATGAACACTT CCGATTGATT TACGATAACA
AGGGACGATT CGTCGTGCAC CGCATCGAAG CCATCGAGGC GCAATACAAG CTGTGCAAGG
TGAAGAGCAA AAAGCTCGGG GATAAGGGCG TGCCGTGCGT CGGCTTGCAC GACGGACGCA
CGATTCGATA CCCCGATCCG CTCATCAAGG AGGGTGACTC CGTCATGGTT GACATCGCGA
CGAACAAGAT TACCGATTTC GTCAAGTTTG ACGTCGGTGC GTTGTGCATG ATCACGGGCG
GCCGCAACGC CGGTCGCGTC GGGGTGATTC AACGCCGCGA AAAGCACATC GGAAGCTTTG
AAATCGTGCA CTTGAAGGAT GCCGCGGGTC AAGAGTTTGC GACGCGCGCG ACGAACGTGT
TCGCGATCGG CACCGGGAGC AAGCCGATGA TTTCTTTGCC CAAGGGTAAG GGTATCAAGC
TCTCCATCGT CGACGAGCGC CACTAG
 
Protein sequence
MARGLKKHLK RLNAPKHWML DKLGGVFAPK PSPGPHKSRE CLPLCLILRN RLKYALTYKE 
VTTILMQRVV KVDGKIRMDK CYPCGIMDVV SIEKSDEHFR LIYDNKGRFV VHRIEAIEAQ
YKLCKVKSKK LGDKGVPCVG LHDGRTIRYP DPLIKEGDSV MVDIATNKIT DFVKFDVGAL
CMITGGRNAG RVGVIQRREK HIGSFEIVHL KDAAGQEFAT RATNVFAIGT GSKPMISLPK
GKGIKLSIVD ERH