Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_18387 |
Symbol | |
ID | 5005744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009369 |
Strand | + |
Start bp | 360635 |
End bp | 362359 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | |
GC content | 68% |
IMG OID | 640421165 |
Product | predicted protein |
Protein accession | XP_001421635 |
Protein GI | 145354740 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0535832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCGGCG CGTGCCGCGC GCGGCGCGCG AGCGCGAGAG AGACGACGAC GCGCGCGGAA TTCTGCGCGC CGTGTCGCGA CGGCGCGAGA GCGACGACGA CGCGCGCGAC GCGCGTCGCG GACGGGGCGT CGTTCGACGT CGTCGTGTGC GGCGCGGGCG CGGCGGGGAC GTCGTTCGCG CGGACGTACC TGGAGACGAC GGCGCGGGGT GGCGACGGCG ACGGCGACGG CGACGGCGAC GGCGACGGCG CGCGCGGCGC GAGGCTGCTG CTGCTCGATC GCGGCGGATG CGCGAAGACG GTCGAGCGCG TGGAGCGCGT GACGCGGCGG GCGTCGGTGT ACGGCGCGCG GGAGGACGCG CTGGGGGCGC TGGAGGCGCT GGGGGCGCGG ACGGCGACGG CGAGCGTCGC GGCGTGCGAC GCCGAGTCGA AGACGTTGAC GCTGGACGAC GGCGCGCGCG TGCGGTACGG CGCGCTGTGC GTCGCCACGG GGGCGACGCC GCGATGTCCA CTGCCGGAGG CGAGCGATGG AGCGGTCGAC GCGCACGAGG TGCGAGACGT GGAGAGCGCG GACGCGCTGG CGAGACGGTT GAGCTCGATG ACGGCGACGG CGAGCGCGGA TTCGGATTCA AAGACGAAAC GGATCGCGAT CGCGGGGAAC GGAGGGATCG CGCTCGAGCT CGTCGACGCG CTATGTGTGC GAGGTTTGCG CGCGCGAGGG TTGGAGGCGT GTGAATTGGT GTGGTTGGTG AAACACGGCG AAGTCGGCGA CGCCTTTTTC GACGTCGACG CCGCGGATTT CTTGCTGCGC GCGCTCGACG CGAGACGGCG AGACGGCGAG GCGAAAGACG ACGACGGCGC GGACGTGGAC TGGGACTCAC CGACGCCCGA ACGCGGTGCC GGACGATCGA CGAAGAAGCG CGCGCGAGGG CGCGAATCAG GCGCCGCCGC CGGTCCGGAT TGGCTCGACA GATTTAGAGC GAAGAGCGCG GCGGACGACG CGCGCGCGCC TCTCAGCCGC ATGAAGCTTC GCGTGCTGAA AAATGTGTGC ATACGCGAAG CGCGTAAAGA CGCAAACACC GGCGTCAACG TATTGACGCT GAGCGATGGG ACGACGATCG AGGTGGACGC CGTCGTCGCC GCCGCGGGCG TCGAGCCGAG ATGCGATTGG CTCGACGAAG TCGCCGCGCC GAGGTCGAAA TCAGACGGCG GTATACTCGT CGATGCGTGC ATGCGCACCG TAGGACCGTA CGGCGACTCA ATATTTGCCG TCGGCGACGC GTGCACGATG TCGGCGCGCG CGTCGAACCC AGAGACGCCG TGGTTTCAAA TGCGACTGTG GAGCCAGGCG GCGCAAACAG GCGCCTTCGC CGCGAAAGTC GCCGCGGGCG TCTGCGACGC CGACGCCCTC GGATTCAATT TCGAAATCTT TACCCACGTC ACCAGGTTTT TCGGTCTCAA AGTCATCTTG CTCGGGCTGT ACAACGCCCA GAAGCTCGAC GACGTCCCGG CGAACGAGGT GACGACGTAC CAGCGCGAGT CGCTCGCCGA CGCGACGTAC GTGCGCGTGC TCCTCGTCCG CGGTCGCATG ATGGGCGCCG TGCTCGTCGG CGACACCGAT CTCGAGGAAA CTTTCGAAAA CCTAATCTTA GACGGCGTCG ATCTATCGCG TTTCGGTCCG AGTTTACTCG ATCCCGAGCT CGACTTGGAG GATTATTTCG ACTGA
|
Protein sequence | MCGACRARRA SARETTTRAE FCAPCRDGAR ATTTRATRVA DGASFDVVVC GAGAAGTSFA RTYLETTARG GDGDGDGDGD GDGARGARLL LLDRGGCAKT VERVERVTRR ASVYGAREDA LGALEALGAR TATASVAACD AESKTLTLDD GARVRYGALC VATGATPRCP LPEASDGAVD AHEVRDVESA DALARRLSSM TATASADSDS KTKRIAIAGN GGIALELVDA LCVRGLRARG LEACELVWLV KHGEVGDAFF DVDAADFLLR ALDARRRDGE AKDDDGADVD WDSPTPERGA GRSTKKRARG RESGAAAGPD WLDRFRAKSA ADDARAPLSR MKLRVLKNVC IREARKDANT GVNVLTLSDG TTIEVDAVVA AAGVEPRCDW LDEVAAPRSK SDGGILVDAC MRTVGPYGDS IFAVGDACTM SARASNPETP WFQMRLWSQA AQTGAFAAKV AAGVCDADAL GFNFEIFTHV TRFFGLKVIL LGLYNAQKLD DVPANEVTTY QRESLADATY VRVLLVRGRM MGAVLVGDTD LEETFENLIL DGVDLSRFGP SLLDPELDLE DYFD
|
| |