| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_18322 |
|---|
| Symbol | |
|---|
| ID | 5005672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009369 |
|---|
| Strand | + |
|---|
| Start bp | 179269 |
|---|
| End bp | 180183 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640421093 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421590 |
|---|
| Protein GI | 145354645 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.243335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.581963 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCTT TGGCGCGAAA GGTGGCGGAG GAGAGCGATC ACATGGTCGA ACTCGGACAG
ATTGATTGGC GCACATTCCC CGATGGGTTT CCAGACTTGT TCATCAACGA CGCGTACGAT
GTGCGGGATC GGCACGTGGC GTTTTTAGGC TCGTTTCACA CGCCCGAGGT CATCTTTGAG
CAGTTGAGCA TCATATACTC GCTGCCCAAG ATGTTTGTCG CATCGTTCAC GCTCGTGCTG
CCGTTTTTTC CAACTGGCAC CGCCGAGCGA GTGGTACGCG AGGGCGAGGT CGCCACCGCG
GTGACGTTGG CGCGGATTTT GAGCAACATT CCGCCCTCGC GCGGGGGCCC GACGAGCACC
ATTATTTTCG ATATTCACGC TCTTCAGGAG CGATTTTATT TCGGCGACAG CATCTTGCCA
TGCTTCGAAA GCGGCATACC GCTCTTGCTC GACCGTCTGA ACGAGCTCGA AGACTCGAAC
AACGTCGTCA TCGCGTACCC AGATGAGGGA GCGTACAAGC GATTCAACTC CTTCTTCGCC
GCCGCGGGTT ACGAGTGCAT CGTCTGCACC AAAGTCCGCG AAGGCACCAA GCGCATCGTC
AAGCTCAAGG AAGGCGAACC GATCGGGCGC CACGTCGTTA TCGTGGACGA TCTCGTACAA
TCCGGTTCCA CCCTGATCGA GTGTCAAAAG CTCTTGCACC GACTCGGCGC CGCCAAGGTG
TCCGCCTACG CCACTCACGG CGTTTTCCCC AATGCCTCCT GGAAACGTTT CACCTCCACC
GGCGCCGGCG GCCAGGGTTT CTCAAACTTT TGGATCACCG ATTCGTGTCC ACAAACCGTC
GAGGCCGTTC GAGACGCCGA GCCGTTCGAG GTATTATCCC TCGCCCGCGC CATCGCCGAC
GCCCTCGAGG TGTGA
|
|---|
| Protein sequence | MEPLARKVAE ESDHMVELGQ IDWRTFPDGF PDLFINDAYD VRDRHVAFLG SFHTPEVIFE
QLSIIYSLPK MFVASFTLVL PFFPTGTAER VVREGEVATA VTLARILSNI PPSRGGPTST
IIFDIHALQE RFYFGDSILP CFESGIPLLL DRLNELEDSN NVVIAYPDEG AYKRFNSFFA
AAGYECIVCT KVREGTKRIV KLKEGEPIGR HVVIVDDLVQ SGSTLIECQK LLHRLGAAKV
SAYATHGVFP NASWKRFTST GAGGQGFSNF WITDSCPQTV EAVRDAEPFE VLSLARAIAD
ALEV
|
|---|
| |