Gene OSTLU_17428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17428 
Symbol 
ID5004480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp517387 
End bp519159 
Gene Length1773 bp 
Protein Length590 aa 
Translation table 
GC content60% 
IMG OID640419901 
Productpredicted protein 
Protein accessionXP_001420367 
Protein GI145352040 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.006002 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.594613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACGC AGGGCGGCAC GGCGCTGATA AGCACGACGG CGGAGTGGCG AGCGCTGAAG 
GAACACTTCG CGAATGAGAT CGATAAGACG CACCTGAGAG ATTTGATCGC GGACGCGAAG
CGATGCGAGG AGCTCGTGAT TGAGAGCGAC GGGGTGTACT GCGACTTTGC GAGACAGCGA
GTGACGCACG ATACGATGAC GAAGTTGTAC GATCTCGCGC GCGCGGCGGG GGTGAAGGAG
AAGATCAATG CGATGTTTAA TGGGGAGGCG ATCAACTCCA CGGAGAACCG GGCGGTTTTG
CACGTCGCGA CGCGGGCGCC GAAGGATAAG GTGATCAACG TCGACGGGAA AAACGTGGTG
CCGGACGTGC ACGACGTCTT GGATAAGATT AAGGACTTTT CTGAGCGCGT GCGCAACGGG
GAATGGGTCG GGGAAACGGG TAAGCCGTTG AAGGATGTCG TGGCGATCGG GATTGGTGGA
TCTTTCCTCG GCCCGCTCTT CGTGCACACG TCGTTGCGCA CGAACCCGGA AGCCGCCGAC
GAGGCGCGAG GGCGTCAGCT TCGGTTTTTG GCCAACGTCG ACCCGGTCGA CGTCGCTCGC
TCGTTAAACG GTTTGGATCC GGAAACGACG CTCGTGATCG TGGTTTCGAA GACGTTCACC
ACGGCGGAGA CTATGTTGAA CGCGCGCACC GTGCGCGCGT GGATTCGCGC GTCCCTCGGC
GAAGCCGCGG TGTCAAAGCA CATGGTGGCC ATTTCGACCA ACTTGAAGCT CGTTGAAGAG
TTTGGCATCG ACCCTGATAA CGCTTTCGCC TTCTGGGATT GGGTTGGCGG GCGATACTCC
GTGTGCAGCG CCGTGGGGAT GTTGCCGCTT TCGCTCCAGT ACGGCTACGA CACGATGGAG
CAATTCTTGA AGGGCGCGTG GTCGATGGAT CAACACTTTG CCAACGCGCC GTTCGAGAAG
AACTTACCGC TGACGCTCGG TATGTTGTCC GTGTGGAACG TCAGCTTCCT GGATTGTCCG
GCTCGCGCCA TTTTGCCGTA CACGCAAGCG CTCGCCAAGC TCGCGCCGCA CATTCAGCAA
GTCGCGATGG AATCCAACGG TAAGGGCGTC GCCATCGACG GCACCCCGCT CGATTACGAA
ACCGGTGAGA TTGATTTCGG TGAGCCCGGT ACGAATGGTC AGCACTCCTT CTACCAGCTC
ATTCATCAAG GTCGCACGAT TCCGTGCGAT TTCATCGGCA TCATCAAATC GCAGCAAAGC
GTGTACTTGA AGGGTGAAAT CGTCTCCAAC CACGACGAGT TGATGTGCAA CTTCTTCGCC
CAAGCCGACG CGCTCGCGGT TGGGAAATCC GCCATCGAGC TTCGTGCGGA ATCTTGCCCG
GATGCGTTGA TCCCGCATAA GACTTTCACC GGTAACCGTC CGTCGTTATC CATTTTGCTC
CCCGAGCTCA ACGCGTACAC CACCGGTCAG CTCTTGTCGC TCTACGAGCA CCGCGTCGCG
ACGCAAGGCT TCGTCTGGGG CTTGAACTCG TTCGATCAAT GGGGCGTCGA GCTCGGCAAG
GTGCTCGCCT CCCGCGTGCG CACGTCCATG AACAGCAAGC GCACCAAGGG TGAAATCATG
ACCCCCGGCG ACGGCTTCAA CCCGTCCACC ACCGCCCTGT TGAACCGCTA CCTCGCGGGC
AAGGCGAAGC TCATCTATCC GGAGCCCAAG GACGTGTTCC CGTGCGATTT GATCGACGGC
GACGAGTGCC GTCCGCCCAC GTCGTACGTA TGA
 
Protein sequence
MGTQGGTALI STTAEWRALK EHFANEIDKT HLRDLIADAK RCEELVIESD GVYCDFARQR 
VTHDTMTKLY DLARAAGVKE KINAMFNGEA INSTENRAVL HVATRAPKDK VINVDGKNVV
PDVHDVLDKI KDFSERVRNG EWVGETGKPL KDVVAIGIGG SFLGPLFVHT SLRTNPEAAD
EARGRQLRFL ANVDPVDVAR SLNGLDPETT LVIVVSKTFT TAETMLNART VRAWIRASLG
EAAVSKHMVA ISTNLKLVEE FGIDPDNAFA FWDWVGGRYS VCSAVGMLPL SLQYGYDTME
QFLKGAWSMD QHFANAPFEK NLPLTLGMLS VWNVSFLDCP ARAILPYTQA LAKLAPHIQQ
VAMESNGKGV AIDGTPLDYE TGEIDFGEPG TNGQHSFYQL IHQGRTIPCD FIGIIKSQQS
VYLKGEIVSN HDELMCNFFA QADALAVGKS AIELRAESCP DALIPHKTFT GNRPSLSILL
PELNAYTTGQ LLSLYEHRVA TQGFVWGLNS FDQWGVELGK VLASRVRTSM NSKRTKGEIM
TPGDGFNPST TALLNRYLAG KAKLIYPEPK DVFPCDLIDG DECRPPTSYV