Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_17428 |
Symbol | |
ID | 5004480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009365 |
Strand | + |
Start bp | 517387 |
End bp | 519159 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | |
GC content | 60% |
IMG OID | 640419901 |
Product | predicted protein |
Protein accession | XP_001420367 |
Protein GI | 145352040 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.006002 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.594613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGACGC AGGGCGGCAC GGCGCTGATA AGCACGACGG CGGAGTGGCG AGCGCTGAAG GAACACTTCG CGAATGAGAT CGATAAGACG CACCTGAGAG ATTTGATCGC GGACGCGAAG CGATGCGAGG AGCTCGTGAT TGAGAGCGAC GGGGTGTACT GCGACTTTGC GAGACAGCGA GTGACGCACG ATACGATGAC GAAGTTGTAC GATCTCGCGC GCGCGGCGGG GGTGAAGGAG AAGATCAATG CGATGTTTAA TGGGGAGGCG ATCAACTCCA CGGAGAACCG GGCGGTTTTG CACGTCGCGA CGCGGGCGCC GAAGGATAAG GTGATCAACG TCGACGGGAA AAACGTGGTG CCGGACGTGC ACGACGTCTT GGATAAGATT AAGGACTTTT CTGAGCGCGT GCGCAACGGG GAATGGGTCG GGGAAACGGG TAAGCCGTTG AAGGATGTCG TGGCGATCGG GATTGGTGGA TCTTTCCTCG GCCCGCTCTT CGTGCACACG TCGTTGCGCA CGAACCCGGA AGCCGCCGAC GAGGCGCGAG GGCGTCAGCT TCGGTTTTTG GCCAACGTCG ACCCGGTCGA CGTCGCTCGC TCGTTAAACG GTTTGGATCC GGAAACGACG CTCGTGATCG TGGTTTCGAA GACGTTCACC ACGGCGGAGA CTATGTTGAA CGCGCGCACC GTGCGCGCGT GGATTCGCGC GTCCCTCGGC GAAGCCGCGG TGTCAAAGCA CATGGTGGCC ATTTCGACCA ACTTGAAGCT CGTTGAAGAG TTTGGCATCG ACCCTGATAA CGCTTTCGCC TTCTGGGATT GGGTTGGCGG GCGATACTCC GTGTGCAGCG CCGTGGGGAT GTTGCCGCTT TCGCTCCAGT ACGGCTACGA CACGATGGAG CAATTCTTGA AGGGCGCGTG GTCGATGGAT CAACACTTTG CCAACGCGCC GTTCGAGAAG AACTTACCGC TGACGCTCGG TATGTTGTCC GTGTGGAACG TCAGCTTCCT GGATTGTCCG GCTCGCGCCA TTTTGCCGTA CACGCAAGCG CTCGCCAAGC TCGCGCCGCA CATTCAGCAA GTCGCGATGG AATCCAACGG TAAGGGCGTC GCCATCGACG GCACCCCGCT CGATTACGAA ACCGGTGAGA TTGATTTCGG TGAGCCCGGT ACGAATGGTC AGCACTCCTT CTACCAGCTC ATTCATCAAG GTCGCACGAT TCCGTGCGAT TTCATCGGCA TCATCAAATC GCAGCAAAGC GTGTACTTGA AGGGTGAAAT CGTCTCCAAC CACGACGAGT TGATGTGCAA CTTCTTCGCC CAAGCCGACG CGCTCGCGGT TGGGAAATCC GCCATCGAGC TTCGTGCGGA ATCTTGCCCG GATGCGTTGA TCCCGCATAA GACTTTCACC GGTAACCGTC CGTCGTTATC CATTTTGCTC CCCGAGCTCA ACGCGTACAC CACCGGTCAG CTCTTGTCGC TCTACGAGCA CCGCGTCGCG ACGCAAGGCT TCGTCTGGGG CTTGAACTCG TTCGATCAAT GGGGCGTCGA GCTCGGCAAG GTGCTCGCCT CCCGCGTGCG CACGTCCATG AACAGCAAGC GCACCAAGGG TGAAATCATG ACCCCCGGCG ACGGCTTCAA CCCGTCCACC ACCGCCCTGT TGAACCGCTA CCTCGCGGGC AAGGCGAAGC TCATCTATCC GGAGCCCAAG GACGTGTTCC CGTGCGATTT GATCGACGGC GACGAGTGCC GTCCGCCCAC GTCGTACGTA TGA
|
Protein sequence | MGTQGGTALI STTAEWRALK EHFANEIDKT HLRDLIADAK RCEELVIESD GVYCDFARQR VTHDTMTKLY DLARAAGVKE KINAMFNGEA INSTENRAVL HVATRAPKDK VINVDGKNVV PDVHDVLDKI KDFSERVRNG EWVGETGKPL KDVVAIGIGG SFLGPLFVHT SLRTNPEAAD EARGRQLRFL ANVDPVDVAR SLNGLDPETT LVIVVSKTFT TAETMLNART VRAWIRASLG EAAVSKHMVA ISTNLKLVEE FGIDPDNAFA FWDWVGGRYS VCSAVGMLPL SLQYGYDTME QFLKGAWSMD QHFANAPFEK NLPLTLGMLS VWNVSFLDCP ARAILPYTQA LAKLAPHIQQ VAMESNGKGV AIDGTPLDYE TGEIDFGEPG TNGQHSFYQL IHQGRTIPCD FIGIIKSQQS VYLKGEIVSN HDELMCNFFA QADALAVGKS AIELRAESCP DALIPHKTFT GNRPSLSILL PELNAYTTGQ LLSLYEHRVA TQGFVWGLNS FDQWGVELGK VLASRVRTSM NSKRTKGEIM TPGDGFNPST TALLNRYLAG KAKLIYPEPK DVFPCDLIDG DECRPPTSYV
|
| |