| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_17396 |
|---|
| Symbol | |
|---|
| ID | 5004399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | + |
|---|
| Start bp | 452078 |
|---|
| End bp | 453841 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640419820 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420347 |
|---|
| Protein GI | 145352000 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.281146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA CGACCGAGGC GGACGAGCTC GGGGCGTTCG TCGAGGCTGC GGAAGATTTG
AGCGAAAGGC TGACGACGAC GACGACGACG ACGACGACGA CGACGACGCA TCGACCGTTG
AAGAACGTGA AGTTTGTGGT GAAAGATATA TTTGATATCG AGGGACGACG ATGCGGGTTC
GGGTCGCCGG CGTTTAAGCG GACGGGAGGG AAAGGCGGGA CGGCGGGCGC GAAGCGACAC
GCGCGGTGCG TGCGAACGCT CCTGGAGGCG GGAGCGAGCG CGGTGGGGAT GACGACCATG
GATGAGCTGG CGTACGCGAT TAATGGGGAG AACGCACACT ATGGAACGCC TATAAACCCG
CGAGCGCGAG CGTTAGTGCC GGGAGGGTCG TCCTCGGGAT CGGCGGTGGC GTGCGCGGCG
GCGCTTCGAG GATGCGAATT CGCGCTCGGG ACGGATACCG GGGGATCGGT GCGAGTGCCG
GCGTCGTATT GTGGGGTTTA CGGGATACGC ACGAGTCATG GATCAGTATC TATGCGTGGT
GTGCAAGCTT TGGCTCCGAG TTTTGACACC GTGGGGTGGT TTGCGCGATC AATAGATGTC
TTGCAGCGCG TGGGAGACGT GTTGTTGCCA GAGCCCGACA AGCACGCGCC GACGGAACCG
AGCCGCTGGC TTTTGCTGGA AGACGCTGTG AGTGCGAAAC GCTCTACACC ACACTCGCAG
TGTGCTGCGG TTGCCGCGGT GACGGCGCTC CACGAGATTG CGCCGGCGGA TTTCAAGCGA
ATGAATCTCA CAGAGCACTT GCTCGTCGGT TGCCCAAAGT TCCGGTCGCT CGTAAACGGT
CGCGAAGACT ACGGCTTGGA CTGCCTCAGA GAGATGGTTC GCGTGCTCAT GGGGGCGGAA
ATCTGGGAAA ATCTGGGAAA ATGGTACACT GAGGAAAAGC CAAAGCTCGG TGCCGCGGTC
AAGGCGAGGA TGGAAGCCGC GTCAAAGCTC GACGCGGACG AAGTCGAACG CCTCAAGGAA
GTGCGAGAGG AAGTGCGAGA AGAAGTGGAT CGCATATTAG ACGGTGGCGC CATATTCATA
CTTCCCACGA CGCCTGGCAA GGCCCCTAAA CGTGGTCAAA GCGATCAGGC GACCGAATCT
TGGCGAAGAA AGTGTTTTGA GCTGCTGTGC ATCGCGAGCC TGTGCGGTTT GCCGCAGGTG
TCGATACCTC TCGAGGCTCC AAACATCGAA GGTCCGCAAG GGCTGTCACT AATCGCTGGA
TACCAAATGG ACAAAATGTT GATCGGAGCC GCTCGTCAAA TCGTTCCTGC GCTCGTCGAG
GCGTATCCAG ATATCCTAGA AGCTGAGTTA GAGCGCCTGA ATCCACCCGA GGCTCCTGGC
GAATCCGAAA AGACCAAAGG AAATGAAGCC CTGAAGCAGG GCAAGTATCA AGACGCGATC
GAATATTACT CGGTGGCGAT TGGAAAGAAT CCTAAGAGCA AGATTTTCGT AGCAAACAGA
GCCATGGCGC ACCTAAAGCT TGGGAACTAC CAGCTCGCCG AAGATGACTG CACTGAAGCC
ATCAAGCTTG ATGCGCGGTA CGTGAAGGCG TACCTTCGCC GGGCGGCGGC GAGGTCGGTG
GCGGGGAACT ATCTCGAAGC ATTGATGGAT TACGAAGAAG CGTTACGCTT CGAGCCTAAC
AACTCGGACG CGAAGAGAGA AGTGTATAGA ATGAAAAAAA TCATAGGAAT GGCCGATCCA
GGCATGGACG TTGGCGATAT GTAG
|
|---|
| Protein sequence | MEKTTEADEL GAFVEAAEDL SERLTTTTTT TTTTTTHRPL KNVKFVVKDI FDIEGRRCGF
GSPAFKRTGG KGGTAGAKRH ARCVRTLLEA GASAVGMTTM DELAYAINGE NAHYGTPINP
RARALVPGGS SSGSAVACAA ALRGCEFALG TDTGGSVRVP ASYCGVYGIR TSHGSVSMRG
VQALAPSFDT VGWFARSIDV LQRVGDVLLP EPDKHAPTEP SRWLLLEDAC AAVAAVTALH
EIAPADFKRM NLTEHLLVGC PKFRSLVNGR EDYGLDCLRE MVRVLMGAEI WENLGKWYTE
EKPKLGAAVK ARMEAASKLD ADEVERLKEV REEVREEVDR ILDGGAIFIL PTTPGKAPKR
GQSDQATESW RRKCFELLCI ASLCGLPQVS IPLEAPNIEG PQGLSLIAGY QMDKMLIGAA
RQIVPALVEA YPDILEAELE RLNPPEAPGE SEKTKGNEAL KQGKYQDAIE YYSVAIGKNP
KSKIFVANRA MAHLKLGNYQ LAEDDCTEAI KLDARYVKAY LRRAAARSVA GNYLEALMDY
EEALRFEPNN SDAKREVYRM KKIIGMADPG MDVGDM
|
|---|
| |