Gene OSTLU_17365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_17365 
Symbol 
ID5004569 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp388507 
End bp389273 
Gene Length767 bp 
Protein Length234 aa 
Translation table 
GC content63% 
IMG OID640419990 
Productpredicted protein 
Protein accessionXP_001420494 
Protein GI145352312 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0260674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGA AGCAATCGAA ACGACGCGAG CGGACGATCG CCATCGTGTG CACGTCCGCG 
GATTCCAGTG CGTGCGACGC GACGCGACGC GACGACGACG ACGACTGACG GCGCGCGCGA
ATCGAACAGT GGATGGACAC GCGACGGGGG CGTGGCTCGA GGAGATCGCG ACGCCGTATT
ACGCGCTGCT CGACGCCGGA TTCGCGGTGG ACGTCGTGTC CGTGAAGGGC GGGAAGGTGC
CGATCGATTC CGCGAGCGAG TCGGGGGATT TCTTTACCGC GGATTGTCAA AAGTTTTACG
ACGACGAGGA CGCGAAGAAG GCGTTGGCGA ACGCCAAGGC TTTGAAGGGC GTGAAATCCG
GGCATTACGC TGGGATTTAT CTCGCCGGTG GTCACGGGAC GTGCGTCGAT TTCTTGAATA
ACGCGACGTT GACGCGCGTG ATCGAAGAGA CGCTGGCCGC GGATAAGCCG GTGGCGGCGG
ATTGCCACGG CCCGGTGGCG CTGTTGGCGT GTAAAAAGCC CAACGGCGAC TCGATTCTGA
AGGGGACGAA CGCGACGTGC TTCACGGACG CCGAGGAAAC CGCGGTTGGG TTGGCGGAGA
AGGTGCCCGT CTTGCTCGAG ACCGAGTTCA AGAAATTGGG CGCGCAATTC AACGGCGCCG
CCGACTGGAC GCCCAACGCC GTCACCGACG GCAAGCTCGT CACCGGTCAA AATCCCGCAT
CGTCCAAGGC GTGCGTCGAC GCGTTTTTGG CGCTCTTGAA AAAGTAG
 
Protein sequence
MGGKQSKRRE RTIAIVCTSA DSMDGHATGA WLEEIATPYY ALLDAGFAVD VVSVKGGKVP 
IDSASESGDF FTADCQKFYD DEDAKKALAN AKALKGVKSG HYAGIYLAGG HGTCVDFLNN
ATLTRVIEET LAADKPVAAD CHGPVALLAC KKPNGDSILK GTNATCFTDA EETAVGLAEK
VPVLLETEFK KLGAQFNGAA DWTPNAVTDG KLVTGQNPAS SKACVDAFLA LLKK