| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_16804 |
|---|
| Symbol | |
|---|
| ID | 5003783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009363 |
|---|
| Strand | - |
|---|
| Start bp | 374634 |
|---|
| End bp | 377303 |
|---|
| Gene Length | 2670 bp |
|---|
| Protein Length | 889 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640419204 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001419793 |
|---|
| Protein GI | 145350815 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0359492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.18416 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACGG CGCGGCGTCG CGGTGTCGCG ATCGCGGCCG TTGGGCGCGC GGCCGCGACC
GCAGACAGCG ACTCGCGTCG AGGCGCGTCG AGGCGGCGCA TGTCGGCGGA GACGACGCCC
GCGGCGTCGC CCGCGGCGTC GCCGAGCGCG CGCGCGACGC CGGGCGCGCG CGCGACGCCC
AGACGCGATG ACGCCGCGCG ACGCGGGACA TCGCATTCGC CAACGGCGAA CGAAAACGCG
ACGCCGACGC GCGCGGACGC GACGACGCGA CGCGTGTTCA CCGTGGATGA CTTCATGCGC
GTCGAAGACG TCGTCAAGGG CGAACGGGAC TGGCAGAGCG TGCGACCGTG CGTGCGGAGG
GCGTTTGAGG GAATGGCGTA CGTGCTGCGT CGCCACGAGC GCGGCGCCGA GGCGACGCGC
GCGGAGCTGG AGGCGCTGAG AACGCGCTCG ATGAGCGCTG GCGCGGAAAC GGCGATCGTG
GCTTCGAACG CGGCGCGATC GGAGGTCGAC GCGCTGAAGT TGGAGCTGGC GGAGGCGAGA
CACGAGGCGG CGGAACGAAG GGTGGAGGCG CTGGAGGACG CGACGAACGC GCTGCGAGAG
GAGTTGCAAG CGTCGAGGGC GATACACGCG GCGACGCTCG ATCGCTTGGC GGCGCTGGAG
ACGCTGCACG CGTCAACGGC GAGTAAGGTA GCGGTGGACT TGTTTGAACT CGAGACGCAG
ATTAGTGTGA AGGCGACGGA GGGCGCGGCG GCGGCGGCGA AAGCCGTGGA CGCTCGACTG
GAGACCATGG CGGGCGAGAT GTCAGACGTC ACCACGCTCG TGCGAGAGTT GGAGGTTGAA
GTGCAGGAGA CGCGACTAAA GGCGAATCAA ACTGCGCTGT CACTCGCTGC GGCGGACGTG
CCGTCCATCG CGAGCGAGTT GGAAATCGTG AAGGCGCGTG CGGCGCGCGC TTCGCAAGAC
GCCAACACCG TCAGCGAGGC TCTACTCGAG GTGCGCGAGC TCGCGAATTC CATGGAGCGT
TTGAGTGATG ATTGTGCCGA GGATGCTAAG CGAGTGCACG ATCGATGTGA GCACGTCGAC
CAGACGTATG CGCGGTTCAA AGAAGCGTTG GCGCAGACGG AGAAGATGGA ATCGATGGCA
AATGACTTTG TCGAACGCAT CGAGTCTCGA GGCCAGCAAA CTATCGATCG CATAGAGAAG
GACGTCCAGC GTATCGGGAC GTTGGGCGAT GAAATTGCAT CGACGGCTGA GCAACACGCG
AGCTTGGTAC AGGAGCAAGG CGAAGTTTTG TCGTCTCAGC TCAAGGAGTG GGGCGCAAAG
GTTGTGGAGA AAGTCACCCA AAAGGCTGAA TCAGCCGTGA CAGAAGTCAT GGAATATCGA
ATTCGAGAAA TTGAGTCGTC GACGGATAGC GCCGCCGCGC GAAACGCCGA GCGGGCCGCA
CAAGAGACGC GAAAGTGCGT CGCGCTCGCG GAAGAGGCGA TGCGCAAAGC GGATGACGAA
AACAACGCGT TCAAGGAGAG CGTACTCTCG AGCGTGAATC AAATGAAGGC TGCGTCGGAA
CGCGCGGATG AGTTAAAACA GTGGATCAAC AATCAGTTCA CATCGTTCGC GGAATTACGC
GAGGAAAGCA TCGCGGCTTT GAGAGGAAGC GAGAAGAATT CTGTCGACAT GTTGTCCAAG
GTCTCCGAGG AGCACACCAG GGCGATGAAG CGCGTGTTGG GTGAAGCCGA GGCGACGCGT
GGCATCACGG ATGCGGGACA CAAGACGCGA ATCGATCGGT TAGATGAACG GTTCGAGAGA
TTTGAGGCGC GCGTCGCTGC GAGTGAGCTT CGCGTGGAAT CTTGCGAGGT GTCGATGAAA
CTCGAGAGGC AGGCGGCCAA ACCAAACGCC GAGGCGCAAG CCGTCGCTCT CCAAACGGTA
GAGAAGAGAC TAAACCATGC TGTTGCCGCT GTGGAGAGAG ATTTGCGCGA AGAGCTGCGC
CTCGCGTCCG ACCGTTCGAC GAACGAGTTC AGAAAGGAGT TGATGATGAT CCAAGACGCC
GTCTTCGGCG GCGTCGGTGG CGCGCGCAGC GAATACGCCT ACTCCCCCGC GGGCTCGCCT
TTGGGCACGC CTAGCAAGTT GACGCACCTT GAAGTGTACT CGGTGTCAGC GTATTCCGAA
CAGTCGGGAT CAATGCAGTC TCGCATCGCA AACTTGACGA GAAAGCAAGA AGAGCAGGAT
CTCATCATTC ACAGCATGCA TGAGAGCATG GAACGCACCA TCAAGGATCG ACCGTCGACG
TCAACGGTCC GTGAGCTCTT TGACGATGTC TCCAAGCGTG TCGAAGCGAT GCAAGAGAGT
ATCGAGTGGG ACAAAGTTGA ACGCAGCAAG ACGAAACGTA CGCTCACTGA GCTTCGCACA
TACGTCGACG ATCGTTGCAC AAAGATGGAG ACGCAGACAC TGCGCGACTT CAATAAATTT
GGTTCCGAAA ACGCAGAAAT GCACATTCCG CGCAGCGCAA ACTCGTTGGA TTACGGGCGA
AAATTTGTCA CGCATCCCGA GCTACAGGCA GCGATCTCGA TCGTGGAGGA TCACATCCGA
AAATTGTCCA AGCGAATGCG CGAAGAATCC AAAGCGAGTG AAACTTCTGT CTCGGCCGTG
TCAGTAGACG ACGATCTGAT TTCGTTTTAA
|
|---|
| Protein sequence | MPTARRRGVA IAAVGRAAAT ADSDSRRGAS RRRMSAETTP AASPAASPSA RATPGARATP
RRDDAARRGT SHSPTANENA TPTRADATTR RVFTVDDFMR VEDVVKGERD WQSVRPCVRR
AFEGMAYVLR RHERGAEATR AELEALRTRS MSAGAETAIV ASNAARSEVD ALKLELAEAR
HEAAERRVEA LEDATNALRE ELQASRAIHA ATLDRLAALE TLHASTASKV AVDLFELETQ
ISVKATEGAA AAAKAVDARL ETMAGEMSDV TTLVRELEVE VQETRLKANQ TALSLAAADV
PSIASELEIV KARAARASQD ANTVSEALLE VRELANSMER LSDDCAEDAK RVHDRCEHVD
QTYARFKEAL AQTEKMESMA NDFVERIESR GQQTIDRIEK DVQRIGTLGD EIASTAEQHA
SLVQEQGEVL SSQLKEWGAK VVEKVTQKAE SAVTEVMEYR IREIESSTDS AAARNAERAA
QETRKCVALA EEAMRKADDE NNAFKESVLS SVNQMKAASE RADELKQWIN NQFTSFAELR
EESIAALRGS EKNSVDMLSK VSEEHTRAMK RVLGEAEATR GITDAGHKTR IDRLDERFER
FEARVAASEL RVESCEVSMK LERQAAKPNA EAQAVALQTV EKRLNHAVAA VERDLREELR
LASDRSTNEF RKELMMIQDA VFGGVGGARS EYAYSPAGSP LGTPSKLTHL EVYSVSAYSE
QSGSMQSRIA NLTRKQEEQD LIIHSMHESM ERTIKDRPST STVRELFDDV SKRVEAMQES
IEWDKVERSK TKRTLTELRT YVDDRCTKME TQTLRDFNKF GSENAEMHIP RSANSLDYGR
KFVTHPELQA AISIVEDHIR KLSKRMREES KASETSVSAV SVDDDLISF
|
|---|
| |