Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_16541 |
Symbol | |
ID | 5003110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009362 |
Strand | - |
Start bp | 546961 |
End bp | 549273 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | |
GC content | 59% |
IMG OID | 640418531 |
Product | predicted protein |
Protein accession | XP_001419416 |
Protein GI | 145350007 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5047] Vesicle coat complex COPII, subunit SEC23 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.700638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.499516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTGGA ACGTGGTGGC GAATTCGCGA GCCGAGATGA CGAAGTGCGT CGTGCCGTTC GGCGCGGTCG TCACGCCGCT GCGAGAGATC GCGTCGGAGG TCGCGCCGCG CGTGCCGTAC GAGTGCGTGC GGTGCAAGGG GTGCGGGGGG GGGCTGAACC CGTACGCGAG GGTGGATTTC GCGAGCAAGA TCTGGGTGTG CTGCCTGTGC CACGCGAGGA ATCACTTTCC GCCGCACTAC AACGCGCTGA GCGAGACGAA TCTGCCGGCG GAGCTGTTCC CGAGCTACAC GACGATAGAG TACGCGGTGC CGCGAGCGGG ACAGGGGACG GGATGCGGAC CGGGGTATCT GTTCGTCGTC GACGCGTGCG CGGAGGAGGA GGAGTTGACG GCGCTGAAGC AGGCGCTGAC GCAGGCGCTG AGTCTGTTGC CGGAGGACGC GCGGGTTGGG TTGGTGACGT TCGGGACGCA CGTGCACGTG CACGAGTTGG GGTTCGCGGA TTGCCCGAAA TCGTACGTGT TTCGGGGAAA TAAGGAGTTT ACGCAACAGC AGATTAAGGA CCAGTTGACG CTCGGGGGCG GGCACCGGCA GACGAACGGT CGAGCTCCGG GGATGGCGGG CGCGCAGCCG GGGATGAACG GCGCACACCC GGGAGCGATG CCGACGAGCA AGTTCTTGGT GCCGCTGAGC GAGTGTGAAT TTCAGTTTAC GGCGATTTTG GAGGAATTGC AGCGAGACGC GTTCGCGCCG TTGCCGTCGT GCCGACGGTC GCGATGCACG GGCACGGCGC TCATGGTGGC GTCTTGTCTG TTGTCCACGT CCGCGATCGG GATGAACGCG AGGGCGATGT TATTCACCGG CGGCGCGGCT ACGGATGGAG GTGGAACGAT CGTGGCGAAA GATATGGAGC AGGCGGTGCG ATCGCACAAG GACATAGTCA AGGGCGCGGC GCCGTTTTAT CACAAGGCCA AAAAGTATTA CGAACAGGTG GCGATCAACC TGTGCGCGAA TGGACACGTG TTGGACGTGT TCGCGTGCGC GCTCGATCAA GTCGGACTGG CGGAGATGAA AGTTTGCGTG GAAAAGACTG GCGGGAACGT CGTGCTGGCT GAGTCGTTTT CGCACACCGT GTTCAAGACG TCGTTTCAAA AACTTTTCGC CCCAGACGCT GAGGGTGGAT TGGGAATCGC GTACAACGGA CAGTTCGAAG TAATCACGAG CCGCGACGTG AGGACAGCGG GGGTGATCGG ACCATGCGCT GCGCTCGATC GAAAAGGTTT GCCAGGCGCG ACGAGCGACA CGCCCATCGG TAGCGGCGGA ACGACGGCGT GGAAGCTTTG CACACTCACG AACGAAACGT CTCTGGCGGT GTACTTTGAT GTTGCGAATC CGGGTGGGAA AGATCAACAG CCGATGGCCA TGCAAGGGCA GCAAGCGCAA CAGTTTTACC TGCAATTTCT GTGCACGTAC ACGCTCCCCA GCGGCGAGAC GCGCATGCGC GTCATCACGA CGAGTCGTCG TTGGACCGAA GGACAAAATT TGAACGACAT CGCCGCCGGG TTCGATCAAG AAGCCGCAGC CGTGCTCGTC GCTAGGCAGT TGTCTTGGAA GATGGAGACT GAGGAAGAAA CGGATTGCCC CGCGGCGACG AGATGGCTCG ATCGCAAGCT CATCCAGCTG TGCCAGCGCT TTGGCGATTA CAGAAAGGAC GATCCGCATT CGTTTCAGCT CATGCCGCAA TTTAGCATTT ACCCGCAGTT CATGTTCAAC TTGCGACGAT CGCAGTTCGT GCAAGTGTTC AACAATTCGC CCGACGAGAC GGCGTATTTC CGCATGATTT TGATGCGTGA AAACGTCTTC AATTCGTTGG TGATGATTCA ACCCACGTTG ACGGCGTACT CCTTCAACGG TCCTCCCGAG CCCGTATTGC TGGACGTGTG CTCGATCGCC GCGGACAAAA TCTTGGTCCT CGACGCTTAC TTCAGTGTTG TCGTTTTCCA CGGTATGACG ATCGCGCAGT GGCGAAAGGC GAACTATCAA GATCAGCCAG AGCACGTGGC GTTCAAAGAC TTGCTCGCGG CGCCCAAGGC GGAGGCGGAA CAAATAATCG CCACTAGATT CCCCGTGCCG CGTTTGGTTG ATTGCGATCA GCACGGCTCT CAGGCGCGCT TTTTGTTGGC CAAATTGAAT CCGAGCGCGA CGTACAACTC GAGCGCGACG ATGGGTGGCG GATCGGACAT CATTTTCACG GATGACGTGA GTCTGCAAGT GTTCATGGAT CATTTGAAGC GCTTAGCGGT TACCACTAAC TGA
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Protein sequence | MSWNVVANSR AEMTKCVVPF GAVVTPLREI ASEVAPRVPY ECVRCKGCGG GLNPYARVDF ASKIWVCCLC HARNHFPPHY NALSETNLPA ELFPSYTTIE YAVPRAGQGT GCGPGYLFVV DACAEEEELT ALKQALTQAL SLLPEDARVG LVTFGTHVHV HELGFADCPK SYVFRGNKEF TQQQIKDQLT LGGGHRQTNG RAPGMAGAQP GMNGAHPGAM PTSKFLVPLS ECEFQFTAIL EELQRDAFAP LPSCRRSRCT GTALMVASCL LSTSAIGMNA RAMLFTGGAA TDGGGTIVAK DMEQAVRSHK DIVKGAAPFY HKAKKYYEQV AINLCANGHV LDVFACALDQ VGLAEMKVCV EKTGGNVVLA ESFSHTVFKT SFQKLFAPDA EGGLGIAYNG QFEVITSRDV RTAGVIGPCA ALDRKGLPGA TSDTPIGSGG TTAWKLCTLT NETSLAVYFD VANPGGKDQQ PMAMQGQQAQ QFYLQFLCTY TLPSGETRMR VITTSRRWTE GQNLNDIAAG FDQEAAAVLV ARQLSWKMET EEETDCPAAT RWLDRKLIQL CQRFGDYRKD DPHSFQLMPQ FSIYPQFMFN LRRSQFVQVF NNSPDETAYF RMILMRENVF NSLVMIQPTL TAYSFNGPPE PVLLDVCSIA ADKILVLDAY FSVVVFHGMT IAQWRKANYQ DQPEHVAFKD LLAAPKAEAE QIIATRFPVP RLVDCDQHGS QARFLLAKLN PSATYNSSAT MGGGSDIIFT DDVSLQVFMD HLKRLAVTTN
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