| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_15837 |
|---|
| Symbol | |
|---|
| ID | 5002595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009360 |
|---|
| Strand | - |
|---|
| Start bp | 515570 |
|---|
| End bp | 517174 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640418016 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418510 |
|---|
| Protein GI | 145348132 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5260] DNA polymerase sigma |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.391811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAGA TGAACGGGAT CGAGACGTCC GCGAGTGCGG CGACGAGCGA AGAAAGCGCG
AGCGATGCGC GTTGCGATGG TTCCGTGAGC GCCGAGGACA ACACGATCGA TGAAAGCGAT
GCCGAAGACG ATCATTTCGA CGATTCATTC GACGAATACA CGGATGAGGA AGACGATCAT
AACTTTTCGT TCAACGTCGA GGAGACTGAG CTCAACAACA TCGAGAGCGA TCGAGTCGTC
GGCGATGATT CTTTGCATTC GCAAGTGATT GATTTCGTGA AGCATAGCGA GATGTCTACG
CACGAAGCGA GTCGTCGACA ACAGTGTTTC GACGCCATTC AATCCGCCAT CGCTCGACAT
TACGCTAATC ACAAAGATTG CTCTCTGCAC GTATTCGGGA GCGGCGCCAC GGGGCTGGCG
CTCGCAGGAG CCGATCTAGA TTTAGTTTTA CTCGGCGTCG GTCCGCAGTC GCGCAAGGGC
GGCGGTGGTG GGTTTACACG AAGCGAACGC GACGAAATCG TCGGCCACTT GCGAAAAATG
GCTCGATTCT TGCGCAAGGT GAACGCTGTG TCGCGAGCGG AGATCATCGC CTCGGCGAAG
GTTCCGATCA TTAAAATGAA AAGTGCTGTG CCGCCATATA TCGCCGTGGA TCTGTCCTTA
GGAACTTCAA ACGGCCTCGA AGCCGTGTAC TGGATTCGCG AACAAGTCGA GACGTACACG
GCGTTGAAAC CATTGGTCTT TTACTTGAAG CGCCTTCTTA GCACGCATCA CTTGAACGAC
GCCGCGACTG GAGGGTGTGG GGGCTACTTG CTCGTGTCGC TTGTGGTTTC GCACTTGAAA
CAAACGGGTT CAGTGGTAGC TGTAAATAAA GCCGGTTTGT TGGGCGAGCT CTTACTCGGT
TTTCTCCGGC GATTCGGCTC TGTGTTTGAT TACAGAACAA ACGCCGTCGC CGCCGGTCGC
GAATCGGGCG TGATGTCCGC CGCGGAACTC CCCGGTCCAC CGTTTGGGAC GCGGCCGTAC
ATCATGGCAG AAGATCCGCA GGAGCGACTG CGTTGCTTTA CCGCGGCGGC GTATCGATTC
AAAGAGGTTC AGAACCTGTT TAGACTCGCC GCGGAGCACA TCTCGGTGAG CGGCGAGCTC
TCGTTACTCT CCGAGGTCGC CGCGCCACCG CCTAGAAACA GTTTCGGTGC GTTCCCAAAG
AGCGGTCAAC TCATCAAGGT TCGCCAGAAC ACTATGGTCC GCCGCGAATC CTCGCCCTCG
GGGAGCGGGC GGAACAACCA TCAGTATTTC CGCAAAGCGA ACGCGAAAAA CAGCTTCTCG
CCGAACAAAT CCGATTGGAC CGACGATCCG CGCAACGGTA ACAATAAACG TCCTCGTGGT
GCTAGCGCGT GGGCCTCCGA CGGCCACCGC GGCTACGGAG GCACCCCGGC GTCACCGAGC
GCCAAGCGTC GCCGCGCCGC CGACGAGCAG CGCGCGTTTC GCGAGCGCGG CGCCGGCAAC
GCGAAGAACG GCAAAAAGAC CGCGCGCGCC TCGAGTGCGA AGCCCAAGCA GCGCGCAAAG
CTCGCGAGCA AGCAATCTCG CGTCACGAAG AAGAAGAAAA GGTAG
|
|---|
| Protein sequence | MREMNGIETS ASAATSEESA SDARCDGSVS AEDNTIDESD AEDDHFDDSF DEYTDEEDDH
NFSFNVEETE LNNIESDRVV GDDSLHSQVI DFVKHSEMST HEASRRQQCF DAIQSAIARH
YANHKDCSLH VFGSGATGLA LAGADLDLVL LGVGPQSRKG GGGGFTRSER DEIVGHLRKM
ARFLRKVNAV SRAEIIASAK VPIIKMKSAV PPYIAVDLSL GTSNGLEAVY WIREQVETYT
ALKPLVFYLK RLLSTHHLND AATGGCGGYL LVSLVVSHLK QTGSVVAVNK AGLLGELLLG
FLRRFGSVFD YRTNAVAAGR ESGVMSAAEL PGPPFGTRPY IMAEDPQERL RCFTAAAYRF
KEVQNLFRLA AEHISVSGEL SLLSEVAAPP PRNSFGAFPK SGQLIKVRQN TMVRRESSPS
GSGRNNHQYF RKANAKNSFS PNKSDWTDDP RNGNNKRPRG ASAWASDGHR GYGGTPASPS
AKRRRAADEQ RAFRERGAGN AKNGKKTARA SSAKPKQRAK LASKQSRVTK KKKR
|
|---|
| |