Gene OSTLU_15603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_15603 
SymbolRPL13 
ID5001932 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp826610 
End bp827744 
Gene Length1135 bp 
Protein Length221 aa 
Translation table 
GC content61% 
IMG OID640417353 
ProductRibosomal protein L13, component of cytosolic 80S ribosome and 60S large subunit 
Protein accessionXP_001418121 
Protein GI145347319 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4352] Ribosomal protein L13E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCA ACAACCAATT ACCCAACGCG CACTTCAAGA AGGATTGGCA GGGTAACACC 
ATCAACGGCC AATGCCGCGT GCGCACGTGG CTCAACCAAG GTGCGTCGCG CGCGCGATCC
GAGACGCGGC TGCGTGATTA GGTCTTTCAT CGGTCACGAC GTCTCATGAC GCTCGATGCG
ACGCCGTGCG CGACGACGAC GCGATCTCGA CGAACGCACA CTGACGAACG AATTACGTTT
TACCTCGCAC GCAGCCGGTC GCAAGAAGTC TCGCCGTAAC GCGCGTGAGT TGAAGGCGAA
GAAGACGTTC CCGCGCCCCG TCGCGGGCTC GCTCCGCCCG CTCGTGCACC CGCCGACGCA
GCGGTACAAC TTCAAGACCC GTCTCGGTCG TGGGTTCACG CTCGAGGAAT TGAAGGTACG
TATTGAGCTT TCGCGCGTCG ATGCTCGACG GGCGTCACGG ACGACGACAG GCGCCGCACG
AACGCGCGTG CGATGCGACC CTCGATCGCG AACCGAGACT GACGGACCGA TCGTGTACGC
GCGACAGGCG GCTGGTATCT CCAAGAAGAT GGCCCCGACG ATCGGGATCT GCGTCGACCA
CCGTCGTCGT AACCGCAGTG AGGAGTCTTT GGCGGTGCGT ACATTCGAGC GCGACGGCGC
GGGAGCTCAC GCGAGACGGG GGCGCTCAGT TAGGGTCCGC GCGCGCAGAC CCTAACTGAG
CGCCGATGAA GGATGCGATG AGCGCGAGAC GACGCGCGAG GGATGAGAAA CGACGACGAA
CGCGAGACTG ATGATATTAC GTTTTACGAT TACGCAGCTC AACAAGAAGC GCCTCGAGGA
ATACAAGGCC AAGTTGATCT TGTTCCCGCG CAAGAACTCC AAGCCGAAGC ACGGCGATAG
CCCGGCGGCT GACCTCGCCA CGGCGACGCA ACACAAGGGC TCTGTCATCA TGCCGATTGA
GAAGGTTGAG AAGGCGGTTG AGATGGTCGC GGTTACCGAT GAGATGAAGA ACTTCGGCGC
TTACAGAAAG CTTCGCGTCG AGCGCATGAA CGTGCGCCAA GTCGGCCCGC GCATTCTCAA
GGCTATCAAA GCCGAAAAGG ACGCGGAGGA AGCCGCCAAG CTTGCGAAAT TGTAA
 
Protein sequence
MKGNNQLPNA HFKKDWQGNT INGQCRVRTW LNQAGRKKSR RNARELKAKK TFPRPVAGSL 
RPLVHPPTQR YNFKTRLGRG FTLEELKAAG ISKKMAPTIG ICVDHRRRNR SEESLALNKK
RLEEYKAKLI LFPRKNSKPK HGDSPAADLA TATQHKGSVI MPIEKVEKAV EMVAVTDEMK
NFGAYRKLRV ERMNVRQVGP RILKAIKAEK DAEEAAKLAK L