Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_15385 |
Symbol | ClpP4 |
ID | 5001853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | - |
Start bp | 294237 |
End bp | 295196 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | |
GC content | 64% |
IMG OID | 640417274 |
Product | chloroplast Clp protease, subunit of ClpP peptidase complex |
Protein accession | XP_001417979 |
Protein GI | 145347023 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0468078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.200159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACTCG TGACGCGCGC GACGACGACG GCGCCGCGCG GAAGCGCGAC GCGACGCGAC GCGACGACGC GGGCGACGCG ATCGAGGCTA GGTTTATCGC GCGCGCGGCG CGCGGACGGG CGCGGACGCG CGACGCGCGT CGCGCGCGCG GGAGGAGCGT TCTACGAGAA CCCGAACGAA ATCGCGCACG TCGACGGCGT GAACGAGGCG CAGAGAGAGA TTTACGACGC GGTGAACGCG AGCGGGGCGC CGGGCGCGCG CGCGGGGCCG GTGGTGCCGC GAGACCAAAG CGGGTCGCCG TTCGATAGCT TGCTGAGGAA CCGAATCGTG TTTCTCGGCT CGCAGGTCGA TGATTTTAAC GCCGATGCGG TGATCTCGCA GTTGCTGCTG CTCGATCAGC AAGATCCGAC GAAGGAGATT AAACTCTTCA TCAACTCTCC GGGAGGGAGC GTGACGGCGG GGATGGGGAT TTACGACGCG ATGCAGTTTT GCCGAGCGCC CGTGAGCACG GTGTGCCTTG GACTCGCGGC GTCCATGGGG GCGTTCTTGC TCGCGAGCGG GGAGAAGGGT CGCCGCATGT CGATGCCGAA CGCGCGCATC ATGATTCACC AGCCGCTCGG CGGGGCGCAA GGGAGCGCCG TGGACATCGA AATCCAAGCG AAGGAAATCA TGCACCACAA GGCCAACTTG AACAGACTCA TGGCGTTCCA CACCGGACAA GACGTTAAGA CGATAGACGA AGACACCGAT CGCGATCGCT ACATGTCGCC GCTCGAGGCG AAGCAGTACG GAGTCATCGA CATCGTCATC GGCGGCGACG ACGCCGGCTT GAAGATCGAG GGGTCGTTCA CGGAAAAGCT CAAGACGAAG AAGGATTACG TGGCGTGGGG TAACGACGGT AACGACGGTT CGTCTTCTGC GCGATTCACC GGCGACACGC AGGATGCGAA GCTCAACTAA
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Protein sequence | MGLVTRATTT APRGSATRRD ATTRATRSRL GLSRARRADG RGRATRVARA GGAFYENPNE IAHVDGVNEA QREIYDAVNA SGAPGARAGP VVPRDQSGSP FDSLLRNRIV FLGSQVDDFN ADAVISQLLL LDQQDPTKEI KLFINSPGGS VTAGMGIYDA MQFCRAPVST VCLGLAASMG AFLLASGEKG RRMSMPNARI MIHQPLGGAQ GSAVDIEIQA KEIMHHKANL NRLMAFHTGQ DVKTIDEDTD RDRYMSPLEA KQYGVIDIVI GGDDAGLKIE GSFTEKLKTK KDYVAWGNDG NDGSSSARFT GDTQDAKLN
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