Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_14961 |
Symbol | |
ID | 5001626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | + |
Start bp | 267338 |
End bp | 268558 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | |
GC content | 52% |
IMG OID | 640417047 |
Product | predicted protein |
Protein accession | XP_001417199 |
Protein GI | 145345397 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
TIGRFAM ID | [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.000165599 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGACG ATCGCGTGAT TCAGAAATAC GAGCGAGAGG CGAAGGAGAA AAATCGCGAC TCGTGGTACA TGGCGTACAT CATGGATACC AGCGAAGAAG AGCGTGCGAA AGGGAAGACT GTCGAAGTCG GTCGCGCGCA CTTCGAAACG GAAAAGAAGC GTTACACGGT TTTGGACGCT CCGGGTCACA AAAACTACGT ACCCAACATG ATCGCCGGTA CGGCGCAAGC CGACGTGGGG GTGCTCGTTA TTTCGGCGCG TAAGGGTGAA TTTGAAACTG GTTTCGATAA AGGTGGTCAG ACTCGAGAGC ATGCGCAGCT TGCAAAGACG TTAGGCGTCA CAAAATTAGT CGTCGTCGTG AACAAGATGG ATGATCCGAG CGTCGAATGG GCGAAGGAAC GTTACGACGA GATTGAAAAG AAAATCACGC CATTTTTGAA GCAGTGTGGT TACAAGATTG ATGCAGATGT CACCTTCGTA CCGATCTCGG GCTTGACGGG GGCGAACATG CAGAAGAAGG TTGGATCAGA CGTGTGCTCG TGGTATGAAG GAAAGTCATT CTTCGACACG CTCGACGATC TCGAGCCGCT TCCTAGAGAC CCGAACGCTC TGGTAAGATT ACCGGTTATG GACAAATATA ACGAAGCAGG TGCGATGGTC ATGGGTAAGA TTGAATCTGG TACCTTGCGT ATGGGTCAGA CGCTCATGTT GATGCCAAAC AAGGCCGGCG TTAAGGTCGC CGCTTTGTTT CGCGACGAAG TGGAATGCAC GAAATGTTTG CCGGGAGAGA ACGTACGCTT AAAGTTGACG GGTGTTCAAG AAAGTGATAT CCAACCTGGT TTCGTGCTTT GCAGCGTGAA GGAGCCCATT CACATCTGCG AAGAGATTGA ATGCCAGCTT GCGCTCTTGG AACTGCTCGA GCACAACTCC GTCTTCACGA AGGGGTACAA GGCTGTGATT CACATCCACA CGGCAACGGA AGAAGTCGAG GTGACAAAGC TAGTCTCAGA AATCGACACG AAACTACGCA AACCGAAGGA AGGCAAGCCG AAATTCCTGA AGAGTGGTAG CCTCGGTAAC GTTCGCCTCC GCTTTGCCCA ACCGGTGTGC GTAGAAAAGT TCGCCGACTA CGCTCAGCTC GGTCGTTTCA CCTTGCGCGA CGAAGGACGA ACCATCGCCA TCGGTAAAGT GACTCGCCTC AAACCCAAAT CGAGCGATTA A
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Protein sequence | MVDDRVIQKY EREAKEKNRD SWYMAYIMDT SEEERAKGKT VEVGRAHFET EKKRYTVLDA PGHKNYVPNM IAGTAQADVG VLVISARKGE FETGFDKGGQ TREHAQLAKT LGVTKLVVVV NKMDDPSVEW AKERYDEIEK KITPFLKQCG YKIDADVTFV PISGLTGANM QKKVGSDVCS WYEGKSFFDT LDDLEPLPRD PNALVRLPVM DKYNEAGAMV MGKIESGTLR MGQTLMLMPN KAGVKVAALF RDEVECTKCL PGENVRLKLT GVQESDIQPG FVLCSVKEPI HICEEIECQL ALLELLEHNS VFTKGYKAVI HIHTATEEVE VTKLVSEIDT KLRKPKEGKP KFLKSGSLGN VRLRFAQPVC VEKFADYAQL GRFTLRDEGR TIAIGKVTRL KPKSSD
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