| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_14806 |
|---|
| Symbol | |
|---|
| ID | 5000747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | + |
|---|
| Start bp | 875440 |
|---|
| End bp | 876330 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640416168 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416785 |
|---|
| Protein GI | 145344532 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5174] Transcription initiation factor IIE, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.104894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGGT CGTCCAAACG CAAGGCGTCG GTGCTGGAGA AGACGCTGAA TAAGTACCGC
TCTGGGCAAA AGGCGGCATC GAAGATCATG ACCGCGGCGG CGCGCGATCG CGCGGCGCTG
GACGCGCGAT CGGAGGCGCA GTACGCGCGC ATGAAAGCCG CGGCGGAGGC GCAGAAGCTC
GCGGAGGCGG CGGCGATCGC GGCGATGGAG GCGGAGGCGA AACCCGTGGA GCCGGTCAAG
GTGGTGGCGA CGAATCTGCT GGCGAAGCAG AAACACGCGA TCGATACGCT CTTCGCGCAG
CGACGACCGA TGTCGAACGA TGATTTGAGA GTTTTCTTGG GCTTTGATTG CAACGTCGGA
CCGCTGTTCG AGTCGCTGAA GAATCACGAG AAGGTTCGAT ACGACGCGGC GAAGGGGCTG
TTCGAGTACA GGGCGAAGCA CGACGTGTTG TGCAAGGAGG ACGTGTTGGA GCTGGTGAAT
TCGACGCCCG ATGGATTAGC GATCGATGAA ATCGTCGATG CGTACGTCAA GGCAAAGGAT
GATGCGATCG CACTCGCGGA AGAAGACGAT GCGGTGATCA TGTTGACGAA CACGGAGACG
AAGAAGAAGG TTTTGTTTAG AAAGCAGCCC GAGTACGAAG TCGACTTGAG TGAAGATTTC
GTCGGATCCT TTCACGACAT AGAGATCCCC GAGTACGACG TGGACTTCGA TAAGGCGTTG
CGCAGAGAGG GGATCGAACC GACACCGCGT CCAGTGTACG ACTTGGGCCC AGCGCCTGAG
GTGGAAAAGA AGAAGAAGAA ACGCGCGGTG AACTTTGAGC GCATGAACGT CACCAACGCG
CACATGCCCG AGTTGTTCAA GGCGGCGCAA GTCGACCGAT TGGACGGCTA A
|
|---|
| Protein sequence | MAGSSKRKAS VLEKTLNKYR SGQKAASKIM TAAARDRAAL DARSEAQYAR MKAAAEAQKL
AEAAAIAAME AEAKPVEPVK VVATNLLAKQ KHAIDTLFAQ RRPMSNDDLR VFLGFDCNVG
PLFESLKNHE KVRYDAAKGL FEYRAKHDVL CKEDVLELVN STPDGLAIDE IVDAYVKAKD
DAIALAEEDD AVIMLTNTET KKKVLFRKQP EYEVDLSEDF VGSFHDIEIP EYDVDFDKAL
RREGIEPTPR PVYDLGPAPE VEKKKKKRAV NFERMNVTNA HMPELFKAAQ VDRLDG
|
|---|
| |