Gene OSTLU_12688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12688 
Symbol 
ID5002666 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009361 
Strand
Start bp114532 
End bp115401 
Gene Length870 bp 
Protein Length212 aa 
Translation table 
GC content63% 
IMG OID640418087 
Productpredicted protein 
Protein accessionXP_001418612 
Protein GI145348347 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0669113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTACG CCTACCTCTT CAAATACATC GTAATCGGCG ACACCGGTGC GTCCGACGCG 
CCGCGTCGCG CCGCGTCGAC GCGCCGCACC GCGACGACGC GCGCACATTC TCGTTACGCC
GCTGACCGAA CCCACCGTTT TCCGCGCAGG CGTGGGGAAA TCGTGCCTGC TCCTGCAGTT
CACCGATAAG ACGTTTCAAC CCGTGCACGA CCTGACGATC GGCGTCGAGT TCGGGTCGCG
CATGGTGAGC GTGGCGAGCA AACAAGTGAA ATTGCAGATC TGGGACACGG TGCGAACGCG
AACGCGAACG CGAACGCGAA CGCGAACACG AACGAAGACG CGAAAAGAAC GCGCGACGAT
CGACGCGGAC GATCTGTGGC GCGCGGCAAC TGACGTGCGA TCGACGCGCG CGCGCAGGCG
GGACAAGAGA GCTTTCGAAG CATCACGAGG AGCTACTATC GAGGCGCGGC GGCGGCGCTG
CTCGTGTACG ACGTGACGCG CAGGGAGACG TTCGATAACC TCTCGACGTG GTTGCAAGAC
TGTCGCGCGC ACGCGAATCC AAACATGGTG ATCACGCTCG TGGGGAATAA GGCGGACATT
TCGCACAGGC GCGCGGTGTC GACGGAGGAG GGGGAAATGT TCGCCAGGGA GAACGGTTTG
CTCTTCGTCG AGGCGAGCGC GAAGACGGCG GATCACGTCG AGGACGCGTT CATCGCCACC
GCGCGCGAGG TGGTGAAAAA TATCGATGCC GGATTAGATG TGAAGGACGA GAGTAACGGA
GTTAAGCTCG GATACGTCGC GGGAGGAGGC GCGTCGGACA CCGTCGGCTT GAACGCTCCG
CCGCGCGTAG AACAGAGCGG ATGCTGCTAG
 
Protein sequence
MSYAYLFKYI VIGDTGVGKS CLLLQFTDKT FQPVHDLTIG VEFGSRMVSV ASKQVKLQIW 
DTAGQESFRS ITRSYYRGAA AALLVYDVTR RETFDNLSTW LQDCRAHANP NMVITLVGNK
ADISHRRAVS TEEGEMFARE NGLLFVEASA KTADHVEDAF IATAREVVKN IDAGLDVKDE
SNGVKLGYVA GGGASDTVGL NAPPRVEQSG CC