| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_12302 |
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| Symbol | |
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| ID | 5000621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009357 |
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| Strand | + |
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| Start bp | 155931 |
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| End bp | 158093 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640416042 |
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| Product | predicted protein |
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| Protein accession | XP_001416570 |
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| Protein GI | 145344088 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0477917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.996732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCGG CGTACGCGAA GACGCGGCAC GAGCGTAAAC ACAGCGAAGA CGCGTTTCTG
CGCGCGCAGT ACGACGCGAG GCGAAGCGCG CGAGGCTTGG AGACGAAGAC GAAGACGCCG
AGCGCGATGG AGATTTCGAG AGGGGAAAAA GAGGGGAAGG GCGTCGACGG GGAGGTGGTG
CGGCGAGCGA TGCGAGCGGG GATCGAGTAT TATCGAGGGA TACAGGACGA GGACGGACAC
TGGGCGAGCG ACTACGGCGG GCCGATGTTT TTGATGCCGG GGTTGATCAT CGCGGCGAAC
GTCATGGAAA AATCGGAGGA GATCATCGGT GAAGCGCGAG GGCGGGAGAT GCTGAGATAC
CTGGAGAATC ACTTGAACGA GGATGGGGGC GTTGGGTTGC ACATCGAAGG TCACAGTACA
ATGTTTGGGA CGGTTTTGAC GTACGTGGCG ATGCGGTTGC TCGGCAAGGC GGCGGATTCG
CCCGAGTGCG CGAAAACGCG CAAGTGGATC ATCGATCGCG GTGGCGCGAC GCAGGTACCG
TCGTGGGGGA AGTTTTGGCT CGCCGTGCTG GGGGTGTACG AGTGGCACGG GTTGAATCCG
ATTCCGCCCG AGTGTTGGTT GTTGCCGTAT TGGCTCCCCA TGCATCCGGG TCGATTCTGG
TGCCACTGTC GCATGGTGTA CTTGCCGATG AGTTACCTGT ACGGCATCCG GGCCACGGGT
AAACCGACGG CGTTGACCGC GGCGTTGAAA TCGGAGTTAT ACGCCGAGGC ATCGTACGAC
TCAATCAACT GGAACACTGC GAGAAACGCG TGCGCGAAGG AGGACTTGTA CTACCCGCAC
CCGTGGATTC AAGACGTCGT CTGGTCGACG CTCATGAAGG TCGAGCCGTT CTTGATGAAT
TCTCGCGTGC GCAAGGCGGC GTGCGAAGAT GCGATGCGGC AGATTCATTA CGAGGACGAA
AACACGCGCT ACGTGGACAT TGGGCCGGTG AATAAAGTCT TCAATATGTT GTCATGCTGG
TTTGAAGATC CCGATTCAGA GGCGGTGAAG AAGCACATTC CACGCATCGC CGACTACCTC
TGGGTCGCCG AGGACGGGAT GAAAATGCAA GGATACAACG GAAGTCAGCT GTGGGACTGC
GCGTTTTCCG TTCAAGCGAT CGTAGCGACG GGTTTAGCGG ACGAATATGG CGAGTGCTTA
CGTCGCGCGC ACGACTACAT CGAAAAGAGT CAAGTACGAG ACGACTGCCC TGATGTCGAA
AAGTGGTATC GTCACATTTC CAAGGGTGCG TGGCCGTTCA GCACACGCGA TCACGGTTGG
CCGATCTCCG ATTGCTCCTC CGAAGGCTTG AAGGCGGCTT TGACGCTGGC GTCGATGGAC
GAGAAACTCG TCGGCGAGGC GATTCCCGTC GACCGACTCG CGGATTGCGT GAACGTCATC
CTATCCTATC AAAATCGCGG CAGTGGTGGC TGGGCTACGT ACGAAAATAC TCGATCGACG
AAGTGGGTCG AGCTCTTGAA CCCAGCGGAG ACGTTCGGGG ACATCATGAT CGATTACCCG
TACGTTGAGT GCTCGAGCGC GAGTTTGCAG GCGCTGTGCA AATTTTCTGA GCGCTATCCG
GACATTCGCG CCAAGGATAT CGCGCATGCC AAGAAGACTG GCCGAAAGTT TTTGAAAAGT
ATTCAACGCG CCGATGGAAG CTGGTACGGA TCGTGGGCGG TGTGCTTCAC GTACGGAACG
TGGTTCGGCG TCCTGGGATT GATCGCCACG GGGTCGACGT ACGAGACGTG CCCATCGCTT
CGTAAAGCAG TCGAGTTCTT GCTCTCGAAA CAGCAAGAAA ATGGTGGATG GAGCGAGAGC
TATTTATCGT GCGAGAAAAA GGCGTACCAC GAGCTTCGCG ACAAGGATGG TAAGCCGAAG
CCGCACTTGG TAAACACGGG ATGGGCGATG CTTGCGCTCA TCGCCAGCGG TCAACAAAAC
CGCGACGCGA CGCCATTACA TCGCGCCGCA CGATGCATGC TCTCACAACA ATATGAGAAC
GGCGATTTCC CGCAGCAAAG CATCATGGGT GTCTTCAACG CCAACTGCAT GATTTCCTAC
AGTTGCTACC GAAGCATTTT CACACTCTGG GCGCTCGGCG AGTACTGCAA CAAAGTTCTG
TAA
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| Protein sequence | MRAAYAKTRH ERKHSEDAFL RAQYDARRSA RGLETKTKTP SAMEISRGEK EGKGVDGEVV
RRAMRAGIEY YRGIQDEDGH WASDYGGPMF LMPGLIIAAN VMEKSEEIIG EARGREMLRY
LENHLNEDGG VGLHIEGHST MFGTVLTYVA MRLLGKAADS PECAKTRKWI IDRGGATQVP
SWGKFWLAVL GVYEWHGLNP IPPECWLLPY WLPMHPGRFW CHCRMVYLPM SYLYGIRATG
KPTALTAALK SELYAEASYD SINWNTARNA CAKEDLYYPH PWIQDVVWST LMKVEPFLMN
SRVRKAACED AMRQIHYEDE NTRYVDIGPV NKVFNMLSCW FEDPDSEAVK KHIPRIADYL
WVAEDGMKMQ GYNGSQLWDC AFSVQAIVAT GLADEYGECL RRAHDYIEKS QVRDDCPDVE
KWYRHISKGA WPFSTRDHGW PISDCSSEGL KAALTLASMD EKLVGEAIPV DRLADCVNVI
LSYQNRGSGG WATYENTRST KWVELLNPAE TFGDIMIDYP YVECSSASLQ ALCKFSERYP
DIRAKDIAHA KKTGRKFLKS IQRADGSWYG SWAVCFTYGT WFGVLGLIAT GSTYETCPSL
RKAVEFLLSK QQENGGWSES YLSCEKKAYH ELRDKDGKPK PHLVNTGWAM LALIASGQQN
RDATPLHRAA RCMLSQQYEN GDFPQQSIMG VFNANCMISY SCYRSIFTLW ALGEYCNKVL
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