Gene OSTLU_12103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_12103 
Symbol 
ID4999626 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009355 
Strand
Start bp370774 
End bp371643 
Gene Length870 bp 
Protein Length273 aa 
Translation table 
GC content64% 
IMG OID640415047 
Productpredicted protein 
Protein accessionXP_001415472 
Protein GI145340730 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.932364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCG TCGCCGCCCG CGCGCTCGCC TCGCGCAGCT CCGTCGCGAA ATTCGCCTCG 
CGCGCCGCCA AGCACGGTCG CGTCGCGCGC GCCGCGCGCG CCCTCGTCGT CCCGCGGGCC
GAAGCCTCGG GTCCCGTCTG CGTCGTCACC GGCGCGTCGC GAGGGATCGG CGCCGCGATC
GCGCTGGCGC TCGGTCAACA AGGCGCGCGC GTGGTCGTGA ACTACGCGGC GAGCGAAGGA
CCGGCGAACG AGGTGTGCGA GAAGATCAAA GCCGCGGGCG GGGACGCGAT CGCGGTGAAG
GCCAACGTGG CGGTGCCGGA AGACGTCGAC GCGCTGTTCA AGGCGACGAT GGATAAGTTT
GGCGAGGTGA ATGTCTTGGT GAATAACGCC GGGATCACGC GCGATACGCT CATGATGCGC
ATGAAGCTGC AACAGTGGCA AGAGGTTATC GACTTGAACC TCACGGGCGT GTTCTTGTGC
ACGCAAGCGG CGACGAAGGC GATGGGTAAG AAGAAGCCGG TCTCGGGACG CATCATCAAC
ATCACCTCGG TGGTTGGTGT GACCGGTAAC GCCGGTCAAG CGAACTATTC CGCGGCGAAG
GCGGGTGTTA TTGGCTTGAC GAAGACGGTG GCGCGAGAAT ACGCGGGTCG TAACATTCAG
TGCAACGCCA TCGCCCCAGG TTTCATCGCC TCGGACATGA CGGCCGTGCT CGGTGAGGAG
TTGGAAAAGA AGATTCTCAC CACGATTCCG GCCGGCCGCT ACGGTCAACC GGAAGAGATT
GCCGGTTTGG TGAAGTTCCT CGCCATGGAC CCGGCGGCGG CGTACATCAC CGGCCAGACG
CTCCACGTCG ACGGTGGTAT GGTGATGTAA
 
Protein sequence
MSTVAARALA SRSSVAKFAS RAAKHASGPV CVVTGASRGI GAAIALALGQ QGARVVVNYA 
ASEGPANEVC EKIKAAGGDA IAVKANVAVP EDVDALFKAT MDKFGEVNVL VNNAGITRDT
LMMRMKLQQW QEVIDLNLTG VFLCTQAATK AMGKKKPVSG RIINITSVVG VTGNAGQANY
SAAKAGVIGL TKTVAREYAG RNIQCNAIAP GFIASDMTAV LGEELEKKIL TTIPAGRYGQ
PEEIAGLVKF LAMDPAAAYI TGQTLHVDGG MVM