Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_119538 |
Symbol | YvdD |
ID | 5000297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009356 |
Strand | - |
Start bp | 509285 |
End bp | 509869 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | |
GC content | 49% |
IMG OID | 640415718 |
Product | lysine decarboxylase-related protein |
Protein accession | XP_001416413 |
Protein GI | 145343617 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0148223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAC GGCGTCCTAT CGAGTGCGTG TGCGTGTATT GTGGATCGTC GGTGGGTTCG AACTCGTCGT ATTCGGTCGC TGCGCGGCTT TTAGGAGGGG AGCTAGTCAA GAGGGGCATC TCCCTCGTGT ATGGCGGAGG TTCTGTCGGT CTCATGGGTA GTCTCGCAGA AGCTGTTAAT TCTGATGGAG GCTCGGTGCT AGGGATAATT CCTTATTCAC TCGAACCAGA AGAAATAAGC GGTAAGACCC CAGGTCAAGT TGTGGTGACA TCAGGCATGC ACGAACGAAA AACACAAATG GCTGCGCGAG CTGACGCATT CATCGCTCTC CCTGGTGGCC TAGGCACTCT CGAGGAATTA TTCGAAATAG CAACCTGGCG TCAGTTAGGA CATCATGAAA AACCGATTGG AATACTCAAT GTGAACGGTT TCTTCAATCC ACTCTTGAAG TTCTTGGACA ACACTGTGGC TGAGGGTTTT GTCTCAGCAA AAACCAGGGC AAACTTCATC GTTGATGATG ACGCTTCAGA GTTGATCGAG AAGCTTTGTG TTGCTTATTT AAACATGCAA CCGAATGAAC TTTAA
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Protein sequence | MTERRPIECV CVYCGSSVGS NSSYSVAARL LGGELVKRGI SLVYGGGSVG LMGSLAEAVN SDGGSVLGII PYSLEPEEIS GKTPGQVVVT SGMHERKTQM AARADAFIAL PGGLGTLEEL FEIATWRQLG HHEKPIGILN VNGFFNPLLK FLDNTVAEGF VSAKTRANFI VDDDASELIE KLCVAYLNMQ PNEL
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