| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119491 |
|---|
| Symbol | EtnK |
|---|
| ID | 5000455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | - |
|---|
| Start bp | 434862 |
|---|
| End bp | 436501 |
|---|
| Gene Length | 1640 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | |
|---|
| GC content | 42% |
|---|
| IMG OID | 640415876 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416386 |
|---|
| Protein GI | 145343558 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0654217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCTT TCGTCCTTTC CCGACCGGAA CGACCAAGTT ATTGCAAAGT TCGACAAACT
CGACGGAGTC CAAGCGCAAC TGCTTTCTCG AAAAAAGTAG CAACATCACT AAGTGTGGAA
GATGTTGACG CCATCAAAAG TATTTTAAAT TACAAGCATT CGGTGAAGTA AGTTACTCAT
ATCCGCCGCC GATCTTGGAT ATTCTCAATA CCTAAACTTT TTCTGTTAGA CTCGAGTGCG
CACAGTTCAC AGAAGGCTTC TGCAACCAAG TTTTCAAGGT ATCCGATACG AAACGGCGCT
ACATTATTTA AAAACTAAAA TTCACATCTG CACAAGGTCT CATGTGGAGG CGAAACCTTT
GTAGTAAAAA AGTACAGCAA GTTGTCAAAA CTGCGCTGTG ACTTACTGAG GTAGGCGTGA
AGTACACAGT ACATTTCAAC TGTCTCAAGA GCGCGCAGTT GCATCGAGAT GCATAAAACT
TTGGCAGAAC GTGGCATTTG TCCGCATTAT ATTTCACACG CCGATGATAT CATCGTTACT
GAGTACTTGG ATGGCCGAGT TCTCCGAGAA GAAGATATGA AGGAACTTTC GTTCTGCAAG
TCAACTGCTA AATTGTAAGC ACACTCTCGA ATCTTTGAAC AAGAATGTTA AATCTTTTGT
CACAATATCG TAGAATAAGT AGGCTGCACT CAGTGCACGT AGAGGGTGAA TCATTTGAGA
TCTTGAAACC TTTACTTCCC CTGACTTGTG AAGGACGTGA GCGGGCACTC ATATGGAAAT
GGTTTCATCA AATGCTGATG CAGTTGCGAC CACTTGAGGT AGTGTCGAAA TCCCCGGATG
TTAATGAGAC TAAGATTTTC AAAGGGGGGC ATGATCGCTG GTGTTGGGGT CAAGGTGCGG
CGCAAAGCGC AAAGTACCAG TTGGTGGTCG CTCAAGTTGA CAAGTTGACA TTGCTTTAGG
AATTAGAGGA TGAAGTGTTC AAAGTGGAAT CTTTCTTCAA GGCGTGTATA TGAGTGTCCA
AAATTCAATA GTATCTCACA AAATATCCAG AGCGTTCACT TACCTATCTG TTTCTGTCAC
GGTGACCTGA AGCCATCGAA CGTAATCTAC CAACAGGACC GAAACTTCAA GGTACACCAT
AAACTTCACG TTGAAGTCAC TTACTTACAC CTCATACCTT CGTTTCACTA AAGTTGATCG
ACATTGATTT AGCCGGCCCA AATTATCGTG GATTCGATAC AATGAAATTG TTTCGAACTA
CGAACTCCTT CTACGATGAA AGTTTGCTAT CATTTTTGCA AGAGTACCAG GCGGAAAAGA
ATTCAGAAAT GAACGTTGAA GGTGTTCTAT TTCTGCTTGT AGTTAGGATT AGATTAACAC
CTCTGCAGGA CTATTTTATG AGGCTCAAAT GTGCGAGGCA CTCACATGGC TCGAGGTAAG
CTGCTTGCAC TCGAACTATT AAAGACGCAA TCGCCTATTA AGTATTCCCG AAGGCAGCTT
TATTTTTCGC AACACTAGTT CCCATGAATG GAGAGACGTC TCAAAGAAAT CTTTCCCTAT
TTGAAGATAG GTGGTTACAT TACAAGCAGA CACAGTGGAA ATTTGTTTAC TATGGAAAAC
TTCTCAAGGA CATCGGTTAG
|
|---|
| Protein sequence | MHAFVLSRPE RPSYCKVRQT RRSPSATAFS KKVATSLSVE DVDAIKSILN YKHSVKLECA
QFTEGFCNQV FKVSCGGETF VVKKYSKLSK LRCDLLSCIE MHKTLAERGI CPHYISHADD
IIVTEYLDGR VLREEDMKEL SFCKSTAKLI SRLHSVHVEG RERALIWKWF HQMLMQLRPL
EGGMIAGVGV KELEDEVFKV ESFFKSVHLP ICFCHGDLKP SNVIYQQDRN FKLIDIDLAG
PNYRGFDTMK LFRTTNSFYD ESLLSFLQEY QAEKNSEMNV EGLFYEAQMC EALTWLEAAL
FFATLVPMNG ETSQRNLSLF EDRWLHYKQT QWKFVYYGKL LKDIG
|
|---|
| |