Gene OSTLU_10320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_10320 
Symbol 
ID5002357 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp179180 
End bp180202 
Gene Length1023 bp 
Protein Length271 aa 
Translation table 
GC content56% 
IMG OID640417778 
Productpredicted protein 
Protein accessionXP_001418401 
Protein GI145347907 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.065033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.330846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAACAAACGA TTAGAAGAAG CGTGACGTAC GCCGGCACAG GGTTGCGAAG CGGTGAGGTT 
GAGCTGATGC GAGTGCGCCC GGCGAAGGCG GGAGAGGGGC GATACTTTGT GAAGGTGCCG
AGCGGTACGA TCAACGCGAG CGATGAGGAG CTACGGGATA CGATCGATTA CAGCGATGAG
GAGGCTGAAG ATATGTTGCT CGAACGCGTG CGGATGGCTT TGAGTAACAA CGAGGAGGAA
AAGGAAAAGA CGCGAGAGCT GGCGGCGAAT GCGAGGACGG CGTTGGCGGC GGAGATCGAA
GCCGCTGGAT CATACGACGC GAACGAAACG CGAGTGCGAG CGAGCTATGA GCTAGCAAAC
GAAGATGTGC GCTTGAGCTC GGAGTTAAAT GGTGATTTCG TAGTCCGTGG GGCTGAACAC
TTGTTGAGCG CGCTCGAGGC GATGGGAATC GACAACTGCC GCATCGAACT TGAGGGCACT
GGCGAGGTTC CCATTATGGA CGGGAGCGCA TCTTCGTACG CGTACGATAT TTGCTGCGTG
GGACTCACTC CGGCTCGCGC CGTGGATGGT GGCGAAGTTC CGCGTATGGC TTGGAAAATC
ACTGAAAACG TCATGGTGCA AGAAGGCGAC GCTTTTATGA TGTTCAACGT CGACGACGTG
AGTAAGCTCA CGTACGGTAT CGATCTCTCG TACAAAACTA CCGCCATCGG TAAACAGTGG
GAAAGCTGGA CGCCGACTGA GGACGCGCCT TATGTTTTCC ACGTCTCGCC GGCCAGAATG
TTTGGGACTA TGAACGATTT CACTGCGTAC TACCGCGCTG GCTATATTAG AGCAGGTCTA
GAAGATTGTG CTCTCATCGC AAACGGGGAT CAGTACTGGA ACGCACCTCT TCGTGTGAAT
AACGAGCCGG CGCGTCATAA GATTCTCGAT TTGATTGGTG ATTTGTCTCT GCTCGCCGAG
CCCGGGATGA GCGGCGTTCC GGTCGGGCAC GTCATCGCTT ACAAAGCTGG CCACAAGTTG
CAC
 
Protein sequence
QQTIRRSVTY AGTGLRSGEV ELMRVRPAKA GEGRYFVKVP SVRASYELAN EDVRLSSELN 
GDFVVRGAEH LLSALEAMGI DNCRIELEGT GEVPIMDGSA SSYAYDICCV GLTPARAVDG
GEVPRMAWKI TENVMVQEGD AFMMFNVDDV SKLTYGIDLS YKTTAIGKQW ESWTPTEDAP
YVFHVSPARM FGTMNDFTAY YRAGYIRAGL EDCALIANGD QYWNAPLRVN NEPARHKILD
LIGDLSLLAE PGMSGVPVGH VIAYKAGHKL H