Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_10245 |
Symbol | |
ID | 5000611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009357 |
Strand | + |
Start bp | 177372 |
End bp | 178226 |
Gene Length | 855 bp |
Protein Length | 285 aa |
Translation table | |
GC content | 58% |
IMG OID | 640416032 |
Product | predicted protein |
Protein accession | XP_001416576 |
Protein GI | 145344100 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00334407 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCGCGG TGTCGCGGCG GGTGACCCGC GTGCTCGGGC TGAATCCGAG CGCGTTGACA CTGCAGGGGA CGAATACGTA CCTCGTGGGC ACGGGACGCG AACGCGTGTT GATCGATTGC GGCGAAGGAC GGCGTGGGTA CGCGAAAAAT GTGATCGAGG CGATGCGTGC GAGCGGGTGT GAGCGCTTGA AGTGCGTGTT GCTGACGCAT TGGCATCCGG ATCACGTCGG CGGGTTGCGC GGGCTTCGCA AAGCGTTGGG CGAAAACGTG CCGGCGTATA AACGAATTCG TACGAGTAAG GGGGAGTACG ACGCGCGCGA GGGGATGGTG AGCCCGTATA ATGTTCGGGC GTATGTAGAT ATACAAGATG GAGACGTCAT CGCGGTGCCC GGAGCGACGC TTCGAGCAAT ATACACCCCG GGGCACACGA CGGATCACAT GTGCTTCGCG TTTGAGGAGG AGGGGGCAGT TTTCGCAGGT GATTGCGTTT TAAACGGGTC CACGAGCGAT TTCGAGGACT TAACGATGTA TTCATCATCA CTCACGACGA TCAAGGACGA GTTGGAGTCT TTCAAGCGAC GCGGAGTGCA GGAGAATGGA TCGAACAGAC TGTACCCGTC GCACGGCGAC GTCATCGAGG ACGGCGCAAA GAAAATCGAC GCCTACATCA ATCACCGCGT TAGTCGAGAG ACAATCTTAC TGAACACCCT TCGCGAGCAT CGTGAGTATG GGATGACGGC GTGGGAGCTC ACGCGCGCGG TGTACGCATC CCTCGTCTCC TTCGTCGTTC TCTACACGTC GTGTGTGAAA ATCACACGAC AACACATCGA AAAGATGATC AACGACGGCG TCGTG
|
Protein sequence | VRAVSRRVTR VLGLNPSALT LQGTNTYLVG TGRERVLIDC GEGRRGYAKN VIEAMRASGC ERLKCVLLTH WHPDHVGGLR GLRKALGENV PAYKRIRTSK GEYDAREGMV SPYNVRAYVD IQDGDVIAVP GATLRAIYTP GHTTDHMCFA FEEEGAVFAG DCVLNGSTSD FEDLTMYSSS LTTIKDELES FKRRGVQENG SNRLYPSHGD VIEDGAKKID AYINHRVSRE TILLNTLREH REYGMTAWEL TRAVYASLVS FVVLYTSCVK ITRQHIEKMI NDGVV
|
| |