Gene OEOE_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_1727 
Symbol 
ID4416334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand- 
Start bp1647789 
End bp1648499 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content40% 
IMG OID639669886 
ProductGntR family transcriptional regulator 
Protein accessionYP_811236 
Protein GI116491692 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA TGCCTATTTT TCTTCAAATC CGCGATGATT TAGCCGAAAA AATCCGTAGA 
CAGCATTTTA AGGGTGGAAG TCGTTTGCCA GCCGAAAGAG TTTTGGCTGA ACAGTACAAA 
GTTTCTCGAA TGACTTTACG CCAAGCGATT GCATTATTGG TTAACCAAGG TAAATTGATT 
AGAAAACCCG GTTCGGGAAC TTATGTATCC GATCAGGAAA AAGAAGTTTC GGAAAATCTG 
AAGGGTATCA CCAGTTTTAC TCAGATTATG CAATCTCAGG GTAAAAAAGC TCAATCAAAG 
TTCATAGTTT TTAAGCGTCA CTTGCCGTCG GCGATTGAGG CCTCTAATCT TGAAATTGAT 
CGAAATGAAG AAGTTATCAC AATCGAGAGA GTTCGTTATG GGGACGAGGA ACCGATCGCT 
TTTGAAATTA CGACAATTCC GGTTTCTTTA GTCGGCAATA TCAACCGCAG CCAAATGGCT 
CACGGACTTT ATGAGTATTT AGAGGACCGG GGCTTTCATT TTGGTAAAGC TGTTCAGGAG 
ATTTCAGCGG TCGTACCAAA CGAAATCGTT TGTAAACGAT TAAATTTAAC TCTTGGCCAG 
GCAGCTCTTT TTTTGCGTCA AACATCTTAC CTTACTGATG ACAAACCGTT TGAATTTGTA 
AAAACCTATT ACGCTGGAGA CCGATACCGT TTTTATCTTG AAAAGCATTA A
 
Protein sequence
MSDMPIFLQI RDDLAEKIRR QHFKGGSRLP AERVLAEQYK VSRMTLRQAI ALLVNQGKLI 
RKPGSGTYVS DQEKEVSENL KGITSFTQIM QSQGKKAQSK FIVFKRHLPS AIEASNLEID 
RNEEVITIER VRYGDEEPIA FEITTIPVSL VGNINRSQMA HGLYEYLEDR GFHFGKAVQE 
ISAVVPNEIV CKRLNLTLGQ AALFLRQTSY LTDDKPFEFV KTYYAGDRYR FYLEKH