Gene OEOE_1711 details

Gene Information

• Locus tag: OEOE_1711
• ID: 4416404
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Oenococcus oeni PSU-1
• Kingdom: Bacteria
• Replicon accession: NC_008528
• Strand: +
• Start bp: 1629982
• End bp: 1631946
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639669872
• Product: ABC-type multidrug transport system, ATPase and permease component
• Protein accession: YP_811222
• Protein GI: 116491678
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAAAT TAGCCAAAGG AAGAATGAGC ATATGGGCAG TTGCAGCATC AGTCGTTTTT 
ATGATCATTC AGGTTTATAC GATGCTGCTT TTGCCTGATT TGACTTCTAA TTTAATCAAT 
AACGGCGTTA TCAAAGGCAA TATAAACTAC ATATATCATA CAGGTGTCTG GATGGCCTTA 
TATTCGTTCA TCTCGGTTTT AGCCGGTGTG GCTAATGTTT ATACTTCAGC GATTGCCTCA 
CAAAAACTTG GGATGCTCTT AAGACGCGAT ATCTATAACA AAGTAATGAG CTTTTCCAAC 
AAAGAATTCG ACCAAATCGG CACTTCGTCT CTAATTACAA GAACAACCAA CGACGTCGTC 
CAAATTCAAA ATGTCGCCAT GATGTTTTTA AGGATGATGC TTATGTCTCC GATCATGCTG 
GTGGCGGCCA GTATTATGGC CTATAGCAAG TCGCCTCAAT TAACAAAAAT TTTTCTCGTA 
TCGATTCCGG TTTTGGTGAT TGTAATCGGT ATTGCGATGT ACTTTGCGAT ACCACTTTTC 
AAAGCAATGC AGAAAAAAAC CGACCGAATC AATCTGGTTT TTCGTGAGGG ACTGACTGGT 
GTCCGGGTTA TTCGTGCTTT TGGGCGAGAC AAGTTCGAAC AGTCTCGTTT TAAAGATGCT 
AACGATGATT ATACAGACAA TGCCATAAAA GTCTTTACAA TTATGTCGGC AATTTTTCCT 
TTGGTAACCT TGATAATGTC TGGAACAAAT GTCGGTATCA CTTGGTTCGG AGCAAAATTA 
ATCTCCTATC AGGCAATGCA AACCGGTGAC CTGGTTGCCT TTATGACCTA TGCAATGCAG 
GTTATGATCA GTTTTATGCT TCTGTCAATG ATCTTCGTAA TGGTTCCTCG TGCCCAGGCC 
TCGGCGGATC GAATCAATGA ATTATTTAAT TCCAAATCAA CAATTATAGA TCCCAAAGAA 
TCAGTAAAAG CCCTTGAGAA ACCGGAACTG TCTTTCAAAG ACGTTGAATT CTTTTATGAT 
GGTGCTGAAG AAGCAGCGCT CAAAAACGTA AACTTCTCTG CCAAAATTGG TGACACAGTC 
GCAATTATTG GTGGAACCGG CTCTGGAAAA ACGACTTTGA TTAATTTAAT TCCGCGTTTT 
TACGATATTG ACAAAGGATT AATTACAGTT AACGGTCAAA ATATCAAAAA CTACCGTCAA 
CATGATCTTC GCGATTTAAT AGCTCTTACG CCACAAAAAG CAACCCTCTT CACCGGAACT 
GTTCGCGATA ATCTTAAATA TGGAAATCCG AATGCCAGCG ACGAAGAACT CTGGCATGCC 
TTGGATGTTG CCCAAGCCAG TGATTTCATT AAAGAACTGG ACGGCGGTCT GGACGGCCAC 
GTTGAACAAG GGGGCGACAA TTTCTCTGGA GGCCAAAAGC AGCGCTTGGC AATTGCCCGT 
TCTCTAGCCA AAAAAGCTTC AATTTACATC TTTGACGATA GCTTCTCGGC CTTGGACTTT 
AAAACCGATG CCAATTTGCG GGCTGCTTTG AAAAAAGACC CAGAAATTAA AAAATCAATC 
GTTGTTATCG TTGCCCAAAG AATTTCAACG GTTGTCGATG CCGATACTAT TCTAGTTCTT 
GAAGACGGAA AAATGACCGG TGTCGGCACG CATCAGGAAT TAAAGAAAAA AACAAAGCAT 
ATCAAGAAAT CATTGACTCG CAGATTCGGA AAGGAGATCA ATAATGGCCG AAAACAACAA 
AACGACTCAA AAACATCCTG GCGGCCCGCG CGGTTTCGGA CCGCATGGTG GCCCGGGTCT 
GGTAGAAAAA CCAAAACATT TTTGGCCAAC CACAAAACGT TTATTCGGTT ATATGAAAAA 
GCGTTGGCTG GCTGTCAGTT TTGTGGTCGT TTTTGCAATC GGATCAGCAA TTTTCCAAGC 
ACAAACTCCA AAAATTCTTG GAAAAGCAAC GACTCAAATT TATGA 

 

Protein sequence

MIKLAKGRMS IWAVAASVVF MIIQVYTMLL LPDLTSNLIN NGVIKGNINY IYHTGVWMAL 
YSFISVLAGV ANVYTSAIAS QKLGMLLRRD IYNKVMSFSN KEFDQIGTSS LITRTTNDVV 
QIQNVAMMFL RMMLMSPIML VAASIMAYSK SPQLTKIFLV SIPVLVIVIG IAMYFAIPLF 
KAMQKKTDRI NLVFREGLTG VRVIRAFGRD KFEQSRFKDA NDDYTDNAIK VFTIMSAIFP 
LVTLIMSGTN VGITWFGAKL ISYQAMQTGD LVAFMTYAMQ VMISFMLLSM IFVMVPRAQA 
SADRINELFN SKSTIIDPKE SVKALEKPEL SFKDVEFFYD GAEEAALKNV NFSAKIGDTV 
AIIGGTGSGK TTLINLIPRF YDIDKGLITV NGQNIKNYRQ HDLRDLIALT PQKATLFTGT 
VRDNLKYGNP NASDEELWHA LDVAQASDFI KELDGGLDGH VEQGGDNFSG GQKQRLAIAR 
SLAKKASIYI FDDSFSALDF KTDANLRAAL KKDPEIKKSI VVIVAQRIST VVDADTILVL 
EDGKMTGVGT HQELKKKTKH IKKSLTRRFG KEINNGRKQQ NDSKTSWRPA RFRTAWWPGS 
GRKTKTFLAN HKTFIRLYEK ALAGCQFCGR FCNRISNFPS TNSKNSWKSN DSNL