Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1572 |
Symbol | |
ID | 4416195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 1491709 |
End bp | 1492872 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639669737 |
Product | AraC-type DNA-binding protein, response regulator |
Protein accession | YP_811089 |
Protein GI | 116491545 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAACCG CATTGGATGC CATTTTGAAT CATCTTATAA GAGTCCTCCG GGTCCCGATT CGCTTATTTC AGCAGGATCG TTTAATTCAG TACTGGGGGC ATCCTCCACA TTCAGACAAA TTAATCGATA ATCGTGAATT GATTAATCAA CTATTGCTCG ATTCGAGTAA AGATTTTCCA TATTTAAAAT ATTTGTCGGC ACAAAAAGTG ATTGCCGTAA TTTCCGGTAA AAATATTAAA TACCTGATTG GTCCGGTTAC TATTAATGAT TCATCTGAGA AAACACCCGT TTTCGCTCAA ACCGACGATT CTACTTATTC GACAGAATTT TTATTCGAAG AATTAAATTT GCTGCAAAAC GCAATTCATG GAAGCGATCT TCAAAATTCG GACATTTTTA TCAATAATCA CTTGAGCGAA AATAAAATTA GAAACAACGA TGCACAAATA GCCCGTTATT CCAGTGACAA CCAAGAAAAC GAATTTGTTC ATAATCCATA CGATCAGGAA GTAAGAGAGC TTCGCAGCGT GACGGAAGGT AACTTATCGG CCCTGAAGGA AAGTATCCAC GAGTCATACG AAGGGAGTTT TGCTACACTT GGACCAACCA AATTGCGTTC TTTGAAAAAT CTGGCAATTG TTGATTTGGC CTTGTTAGCA CGAGCCGCCA TTAAAGGCGG AATTGATTAT GAACAATCTT TTACAATCAA TGACCAATAT ATTCGATCGG TTGAACAAGC CAATAATGTT CAGGACGTAA TTGCTTTAAG TTTGCAGGCA AAAATCCAAT ATACCGAGTT GGTTCATAAT ATTAATTATC CAGTCGAAAA GACAAAGACC AATTTAATCA TCAAACGCTG CAAAAAATAT ATCCAAACTC ATTTGCACAA TAAAATTCAT CTTGAAAAAC TCGCCAAATA TTGTAATGTC AGCGAACAAT ACTTATCCAA AATATTTCAC AATACTCAGC AAACAACTGT AAATGAATAT ATTCAGAGGG AAAAAATCGA AGCGAGCAAA CGCGATTTGA TTTATACAGA CTTGCCGATC AATACGATTG CACTCAATTT TGCTTATGCA TCGACAAGTC ACTATGGAAG TGTGTTTAAA AGAATTATCG GCATGACACC ACTAAAATAT CGCAATACAT TCGGCAAGGT CTGA
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Protein sequence | MKTALDAILN HLIRVLRVPI RLFQQDRLIQ YWGHPPHSDK LIDNRELINQ LLLDSSKDFP YLKYLSAQKV IAVISGKNIK YLIGPVTIND SSEKTPVFAQ TDDSTYSTEF LFEELNLLQN AIHGSDLQNS DIFINNHLSE NKIRNNDAQI ARYSSDNQEN EFVHNPYDQE VRELRSVTEG NLSALKESIH ESYEGSFATL GPTKLRSLKN LAIVDLALLA RAAIKGGIDY EQSFTINDQY IRSVEQANNV QDVIALSLQA KIQYTELVHN INYPVEKTKT NLIIKRCKKY IQTHLHNKIH LEKLAKYCNV SEQYLSKIFH NTQQTTVNEY IQREKIEASK RDLIYTDLPI NTIALNFAYA STSHYGSVFK RIIGMTPLKY RNTFGKV
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