| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1418 |
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| Symbol | |
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| ID | 4415878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | - |
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| Start bp | 1331184 |
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| End bp | 1331876 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639669592 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_810944 |
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| Protein GI | 116491400 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000214693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAGA AACACAGTAA AAAATATTTA GCTGCCGCCG AGAAAATCGA CCATTCCAAA
AAGTATTCAC TTGCCGATGC CGCAACTTTG GTAAAAGATA TTTCATTTAC CAATTTTGAT
TCCAATGTTG AAGTTGTATT TGATTTAAAT GTCGATACAA CTAAAGCGGA TCAACAATTA
CGTGGTGCAA TTGTTTTGCC GAATGGATCT GGTAATCCAA AAACGGTTGT TGTTTTTGCC
GATGGTGAAA AAGCCAAAGA TGCTACTCAA GCCGGTGCTG ATTTCGTTGG TACCGATGAT
TTGATCCAAA AAGTTCAGAG CGGTTGGACT GATTTCGATG TTGCAATCGC AACTCCTGAT
CAAATGGCCA AAGTCGGTCG AGTTGGTCGC GCTTTGGGTC CTAAAGGCCT GATGCCAAAC
CCTAAGGAAG GCACTGTAAC GATGGATGTT ACAAAAGCCG TTAGTGATGC CAAGGGTGGT
CAAGTAACTT ACCGGACTGA TAAAAATGGT AATGTTGCCG TTCCGGTTGG AAAAGTTTCT
TTTGATAGTG ATAAGTTAGC TGAAAATATC AAAAGTGTTT CTTCAACGAT TCTTGGCGCT
CGTCCAAGCA CTGTTAAAGG AACTTATGTA TTAAGTGCTC ACTTGGCTTC AACAATGGGA
CCTGGTGTTG AACTTGATGT TTCTTCATTA TAA
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| Protein sequence | MVKKHSKKYL AAAEKIDHSK KYSLADAATL VKDISFTNFD SNVEVVFDLN VDTTKADQQL
RGAIVLPNGS GNPKTVVVFA DGEKAKDATQ AGADFVGTDD LIQKVQSGWT DFDVAIATPD
QMAKVGRVGR ALGPKGLMPN PKEGTVTMDV TKAVSDAKGG QVTYRTDKNG NVAVPVGKVS
FDSDKLAENI KSVSSTILGA RPSTVKGTYV LSAHLASTMG PGVELDVSSL
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