Gene OEOE_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_1407 
Symbol 
ID4415446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand- 
Start bp1319897 
End bp1320538 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID639669582 
Productthymidylate kinase 
Protein accessionYP_810934 
Protein GI116491390 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.255239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG GTTTTTTTAT TACCATTGAA GGACCGGATG GTGCCGGAAA GACCAGCTTA 
TTGGATAATT TAATGCCGGC TCTCAGAGAT ATTTTTGGCG ATAATCTGAT CGAAACAAGA 
GAACCTGGCG GTGTCAGAAT TTCCGAGGCG ATCCGAAAAA TTGTCCTGGG GCTGAAATAT 
CCGGAAATGA ATCGACGAAC GGAGGCACTA CTTTTTGCAG CTGCGCGGGC TCAACATATG 
GTGGAAAAAA TCGAACCGGC TTTGGCAGAT GGAAAAATTG TTTTGTCGGA TCGCTTTGTT 
GATTCATCGA TTGCTTATCA GGGTGGTGGC CGCGAACTGG GAATTGAAGC TGTCGGCGAA 
ATTAATAACT TTGCTACCAA TGGGTTGCAA CCGAATTTAA CACTCTTGCT TGATCTTCCA 
AGCGAAGTCG GGATTGCAAG AATTATGAAG CATCGTAGTG ATGAGGTTAA TCGTTTGGAT 
AAGGATCGAC TTGTTTTCCA TAAAAAGGTT CGTCAGACCT ATTTGCAGCT CGCCAAAGAT 
CAGCCAAATC GGATAAAAGT GCTTGATGCC ACACAAAGTC CTGAAAAAAT AGCTATTAAT 
GCTTTACAAT TAATTCAAGA AAGTTTGAAA GGTTGGATAT GA
 
Protein sequence
MKKGFFITIE GPDGAGKTSL LDNLMPALRD IFGDNLIETR EPGGVRISEA IRKIVLGLKY 
PEMNRRTEAL LFAAARAQHM VEKIEPALAD GKIVLSDRFV DSSIAYQGGG RELGIEAVGE 
INNFATNGLQ PNLTLLLDLP SEVGIARIMK HRSDEVNRLD KDRLVFHKKV RQTYLQLAKD 
QPNRIKVLDA TQSPEKIAIN ALQLIQESLK GWI