Gene OEOE_1379 details

Gene Information

• Locus tag: OEOE_1379
• ID: 4415485
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Oenococcus oeni PSU-1
• Kingdom: Bacteria
• Replicon accession: NC_008528
• Strand: -
• Start bp: 1289630
• End bp: 1291477
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 639669554
• Product: ABC-type multidrug transport system, ATPase and permease component
• Protein accession: YP_810906
• Protein GI: 116491362
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAATC CGGCCGCAAG AATGAGTGGA AACGGCAATG GACCGAGGCC GATGGCAAGA 
GTCGCCGAAC ACCCGCATAA TTTTTGGGGT ACGACGGTCA GACTGTTTAA GTATCTTGGT 
CGGAACAGAA TTGGTGTTGT TTTTTCGGTT CTTCTCGCGA TTGGGTCGGT TTTGTTGTCT 
GTTTCTGCAC CGAAAATTTT GGGTCGGGCT ACAACGATCA TTTATAAAGG GGTTGTTGCT 
GGTTTGAAGT CCGAAAAATA TCAAATCTCC TACCAACCAA TTATCAAAAT ATTGATTGAA 
GTATCTATTA TTTATGTTCT CTCGGCCCTT ATGAGTTTTC TTCAACAGGT TATCATGACG 
AGAATTTCTC AGAAAACGAT CTTTCGTTTG CGATCGGAGT TCAAAGCCAA AATGGCTCGC 
TTGCCGATCA AATATTATGA TCAGCATCAA AATGGAGATA TTATGAGCCG GGTTGTTAAC 
GACATGGATA ATATTTCCGG GACTCTTCAA CAAGCGCTGA TTCAAATTGT CACTTCCGCC 
TTAACTTTTC TCGGCGTTGT TTTCTTTATG CTGACTATTA GTTGGTCTTT ATCTTTCATT 
GCTTTCATTA CGGTGCCAAT CAGCATTTTT GTTGTTCGTT TTATTGCTCC GCATGCCCAG 
AAACTGTTTG CCAGACAGCA GGCAGTATTG GGAATTATGA ATGGCCAAGT CGAGGAAACT 
TTTTCTGGCC ATGAGGTCAT TAAAACCTTT GATCGTGAAA TTCCAGTGAT TGATAGATTT 
GAAAAACAAA GTCAAAAATA TTATCAAGCC GCTTGGAAAG CTCAATTTAT TTCTGTTTTG 
ATTTTTCCGG CGATGCAGTT TTTAAATAAT CTGGATTATT TGTTAATTGC TGTTTTTGGT 
TCGATTCAAG TTGCGAATGG TCAGTTGCCG CTTGGCGATA TTCAGGCATT TTTACAATAT 
ACCAATCAAT TCTCGCAACC GATTACTCAA ATTGCCAATT TAAGTAATAC AATTCAATCG 
ACGATTGCCA GTGCCGAAAG AATTTTCGAA ATTCTTGATG CGAAAGAAAT GACTAACGAT 
TTCAAAAATT TACCGAAAAA TATCAAGAAT CCTAAATCCT TATTGTCTTT CGATCACGTT 
AAATTTGGTT ACAGTGATAA TTTATTAATC AAAGATTATT CGCTTAAAGT CGATAAAGGC 
CAGATGATTG CAATTGTTGG ACCGACCGGT GCTGGCAAAA CAACGATTAT TAATCTTCTC 
GAACGTTTTT ATGATGTAAA AGATGGTTCA ATTAGATATA AGGGTTTTGA TACCCGGACT 
TTGACGCGAC CGGAAGCCCG TTCTCATTTT GCAATGGTTC TTCAAGAAAC TTGGCTCTTT 
ACCGGAACTG TTTTTGACAA CATTAAATAT GGTAACGAAC AAGCGACTGA AGAACAGGTA 
GTTTCTGCGG CCAAAGAGGC TTATGCCGAT GGTTTCATCC GCCAGCTATC CAAGGGATAT 
CAAACAATCC TCAATGAATC GGCTTCTAAT ATTTCGCAGG GTCAAAGGCA GCTGTTAACG 
ATTGCCCGGG CTTTTCTTGC TGATCCGGAA ATTTTAATCC TTGATGAAGC TACCAGCTCT 
GTTGATACGC GAACAGAAAT TTTAATTCAA AGGGCAATGG AAAAACTGCA AAGTTCCCGG 
ACCAGTTTTG TTGTTGCTCA TCGGCTTTCG ACAATTCAGA ATGCTGATAA TATTGTTGTT 
ATGAATCATG GGTCGATTGT CGAAACTGGA ACGCATGAAG AACTTTTGGA TGCTAACGGC 
TTTTATGCCG ATCTGTATAA TTCACAATTT TCGAATGGAG CCATCTGA 

 

Protein sequence

MRNPAARMSG NGNGPRPMAR VAEHPHNFWG TTVRLFKYLG RNRIGVVFSV LLAIGSVLLS 
VSAPKILGRA TTIIYKGVVA GLKSEKYQIS YQPIIKILIE VSIIYVLSAL MSFLQQVIMT 
RISQKTIFRL RSEFKAKMAR LPIKYYDQHQ NGDIMSRVVN DMDNISGTLQ QALIQIVTSA 
LTFLGVVFFM LTISWSLSFI AFITVPISIF VVRFIAPHAQ KLFARQQAVL GIMNGQVEET 
FSGHEVIKTF DREIPVIDRF EKQSQKYYQA AWKAQFISVL IFPAMQFLNN LDYLLIAVFG 
SIQVANGQLP LGDIQAFLQY TNQFSQPITQ IANLSNTIQS TIASAERIFE ILDAKEMTND 
FKNLPKNIKN PKSLLSFDHV KFGYSDNLLI KDYSLKVDKG QMIAIVGPTG AGKTTIINLL 
ERFYDVKDGS IRYKGFDTRT LTRPEARSHF AMVLQETWLF TGTVFDNIKY GNEQATEEQV 
VSAAKEAYAD GFIRQLSKGY QTILNESASN ISQGQRQLLT IARAFLADPE ILILDEATSS 
VDTRTEILIQ RAMEKLQSSR TSFVVAHRLS TIQNADNIVV MNHGSIVETG THEELLDANG 
FYADLYNSQF SNGAI