| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1169 |
|---|
| Symbol | |
|---|
| ID | 4416577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 1105982 |
|---|
| End bp | 1106410 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639669358 |
|---|
| Product | UspA family nucleotide-binding protein |
|---|
| Protein accession | YP_810730 |
|---|
| Protein GI | 116491186 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0164602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTATA AAAATATTTT AGTTGGCTTG GATGGTTCTT CCCAAGCGGA TAACGCTTTT
AAAGTAGCTT GCGGATTGGC AAACGCGCTT TCAGCCGATC TTCATCCAAT TTGGATTGTT
AATCGAGACA GAGGAATGGA TTCCTCCTTT GGTGTTAACG AAGATTTCTA TCGTGATCAG
TATCATCAAG TTCAAGATAA GCTTGTTTCC TATGTCGAGG ATGCGAAAAA AGCTGGTCTG
AAAGTGACAG GCGAAGCCCT CGTGGGCAAC ATTAAATTGG TTTTGGCAAA TGAATATCCA
AAAGAGCACG GAATCGATCT AATTGTTCTT GGTAACACTG GATTGAACAC CGTGGAAAAA
CTGGTTGTCG GTTCGCACAC CAGTTATGTA ATTAGAAATT CAGCTTGCGA TGTTCTTGTT
GTTAAATAA
|
|---|
| Protein sequence | MVYKNILVGL DGSSQADNAF KVACGLANAL SADLHPIWIV NRDRGMDSSF GVNEDFYRDQ
YHQVQDKLVS YVEDAKKAGL KVTGEALVGN IKLVLANEYP KEHGIDLIVL GNTGLNTVEK
LVVGSHTSYV IRNSACDVLV VK
|
|---|
| |