Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1077 |
Symbol | |
ID | 4415145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 1008186 |
End bp | 1009829 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639669271 |
Product | fibronectin-binding protein |
Protein accession | YP_810644 |
Protein GI | 116491100 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.224982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTCG ACGGACTTTT TCTCCATTCA ATGACAAAAG AATTAAATAA GGAATTGGCC GGAGGCAGAA TCACAAAAAT CGCCTTCCCT TTTCCACACG AAATTATTTT GACAGTTCGC TCTTTTCGAA AAAACCGAAA ACTTTTACTT TCAGCTCATC CCGTTATGGC TCGTGCACAA ATTACAAAAG TTGATTTCGA AAACCCTATT ACAGCACCAA ACTTTGTCAT GGTACTGAGA CGTTATCTTC AAGGCGGCAA GATATTAGCC TTCAGACAAA TTGCAAATGA TCGAATTCTG GAAATTTTAG TTGCCAATGC AAATGAAATT GGCGACGCAG TTTCATATAA GATCGTACTT GAAATCATGG GCCGCCATTC AAATATATTT TTCCTTGATT CGGAAAATAA AATCATCGAG CTGATAAAAC ATGTTCCGGC CTTTGAGAAT CGCGTTCGCA TCCTGCTTCC CGGCGCTCAA TACCAAAGAC CGCCAAAGCA GGATTTAATT AATCCTTTCG AATCAAGCGA ATTTACTTCA AATGATCCAC GGATACTGGC GGACCATTAT CAAGGAATGT CAATGGTGTC GGCAAGAGAA GCTGCTGACG CCGAATATTT GACAGATTGG TTCAAGAAAT TCGATCAACC TCAGGCAACG CTGACAAAAA TCAATGAAAA AAAATCCGAA TTCACGGCTT TTCCTTATAA AAGCGTTATA GGCGAAAAAA CATTCTTCCC TTTACTATCA GATCTTTTGG ATGCCTATTA TGCTCAATCG GCTAATCAGT CGCGAGTCCA CGAACTTTCA TCGCAAATTG ATCAAATTGT GAAAAACGAA TTACATAGGA ACCGCCGAAA ATTACAAAAC TTAAATAATG ATTTGATCAA AACAAAAGGA GCCGATAATT ATCGGATCAA GGGCGAATTG TTAACAACTT TTCAAAACAA AGTAATTCGC GGCAACAACT CGATTAGCTT GAATAATTAT TACGATGGGA AAGCAATCGA AATTACTTTA GACCCAAAAA TATCGGCAAA TGCCAATGCT CAAAAATATT TTACAAAATA TCAAAAACTA AAAAAATCAG TTAAATATCT CGATGAACAA ATTAGGCTGG CAAGTAAAGA GCTGGATTAC TTTGAAAATA TCGAAGAGCA ATTAAAAAAT GCCTCGCCTA AAGATCTTGA TCAAATTAAA ATCGAATTGC TCAAAGAAGG ATATTTAAAA GATAAAAAAA GCGATAAAAA ACCTGCCAAA AAAAGATCTA AAGTTGCCAA ACCTGATCGT TTTATTGCTA ATGATGGTAC TTTAATTGAG GTCGGCAAAA ATAATTTTCA AAATGATCAA CTAAGTATGA AAAATCCTAA AAAGGATGAT ATTTGGCTTC ATGTACAAAA GATTCCAGGC TCTCATGTCA TTATTCATTC CAATAACCCA AGTGATAAGA CCCTCATTGA AGCCGCCAAA TTAGCAGCTT ATTTCAGCAA AGCGAAAAAT TCGGCCAATG TCGCTGTCGA TTATCTTCCC GTTGGCAGAT TAAGAAAACC AAACGGGTCG AAACCTGGTT TTGTCGTTTT TGAAGGTCAG CAAACAATTT ACGTTACTCC GAACCGAAAA TTAGTTGAAG AATTAAAGGC TTAG
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Protein sequence | MAFDGLFLHS MTKELNKELA GGRITKIAFP FPHEIILTVR SFRKNRKLLL SAHPVMARAQ ITKVDFENPI TAPNFVMVLR RYLQGGKILA FRQIANDRIL EILVANANEI GDAVSYKIVL EIMGRHSNIF FLDSENKIIE LIKHVPAFEN RVRILLPGAQ YQRPPKQDLI NPFESSEFTS NDPRILADHY QGMSMVSARE AADAEYLTDW FKKFDQPQAT LTKINEKKSE FTAFPYKSVI GEKTFFPLLS DLLDAYYAQS ANQSRVHELS SQIDQIVKNE LHRNRRKLQN LNNDLIKTKG ADNYRIKGEL LTTFQNKVIR GNNSISLNNY YDGKAIEITL DPKISANANA QKYFTKYQKL KKSVKYLDEQ IRLASKELDY FENIEEQLKN ASPKDLDQIK IELLKEGYLK DKKSDKKPAK KRSKVAKPDR FIANDGTLIE VGKNNFQNDQ LSMKNPKKDD IWLHVQKIPG SHVIIHSNNP SDKTLIEAAK LAAYFSKAKN SANVAVDYLP VGRLRKPNGS KPGFVVFEGQ QTIYVTPNRK LVEELKA
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