| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0958 |
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| Symbol | rpmA |
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| ID | 4415236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 895115 |
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| End bp | 895435 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639669160 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_810534 |
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| Protein GI | 116490990 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000205292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGAAA AATTACAAAA CCTAATTAAG TTGGCCCACC ATAAAGGAGG CGGATCTTCA
TCTAACGGAC GTGACTCTGC CGGTCGTCGT TTGGGTGCAA AGCGTGCCGA TGGACAAGAT
GTTCTTGCCG GAACGATTAT TTATCGTCAA CGGGGTACAC ACATTTATCC AGGCAATAAT
GTTGGTCGCG GCGATGACGA TACTTTGTAT GCATTAGTTG ATGGAGTTGT CCGTTTCGAG
CGTAAAGGAA AGACTCAACG CCAAGCATCA ATTTATTCTC GTGAGGAATA TAACGCTAAA
CTGGAAACAC CGGTTCATTA A
|
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| Protein sequence | MLEKLQNLIK LAHHKGGGSS SNGRDSAGRR LGAKRADGQD VLAGTIIYRQ RGTHIYPGNN
VGRGDDDTLY ALVDGVVRFE RKGKTQRQAS IYSREEYNAK LETPVH
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