| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0918 |
|---|
| Symbol | |
|---|
| ID | 4416921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 860059 |
|---|
| End bp | 862482 |
|---|
| Gene Length | 2424 bp |
|---|
| Protein Length | 807 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639669122 |
|---|
| Product | phenylalanyl-tRNA synthetase beta subunit |
|---|
| Protein accession | YP_810500 |
|---|
| Protein GI | 116490956 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTT CTGTTAATTG GATTAAAGAA TATATGCCGG ACTTTCCGGT TAATGATCAA
GTTGATGCTC AAAAAGTAGC TGATCGATTG GCTTTAACTT CGACTGAAGT TGCTGAAAAT
GGCTATCAGA TTCCGCAATC GAGTAATTTG GTCGTTGGTA AAGTTTTGGA AATCAGAACA
ATTGAAAATT CGAGCCATTT AAAAATTGCG ATTGTAAACG CCGGCAAAAA AGATTACCAA
ATCGTTACCG GAGCACCAAA CATCGAAAAA AATCAATTGG TTGTTCTGGC CTTGCCGGGG
GCTCTTTTAC CAAACGGCAA AAAAATTGAG GCGACAACTC TTGATGGAGA AATCAGTCAA
GGAATGTTGG TTTCGTTACA GGAAATCGGT TTTGACGATT CAATCGCACC AAAAAAACAT
GAAGCGGGAA TTTATGTCTT TCCTAAAGAC AATGACGTTA AAGTTGGTGA TGATGCCGTC
AAGGCACTCG GAATCGATGA TTTGATGATT GATACAGAAT TAACTGCTAA TCGCGGTGAT
ATGCTTTCAA TCAGAGGCAA TTTATATGAA TTTTCTGCAC TTTTAGAGAA AGAGTTTAAA
CTTCCCAGTT TAGACCTTCA AGAAAGTAGT AAACTATCTA AATCGCAAAT TTCGGTTAAT
GTCGATCCAA AATTAGCTGA TCGTTATTAT CTTAGAATTA TTAACAACGT AAAAGTTGAA
GAAAGCCCCC TATGGCTTCA ACGCCGCCTT TGGAATTCAG GTCTTCGTCC GATAAACAAC
TTGGTCGATG TTACTAATTA TGTCATGCTT TTATTTGGAC AACCAATGCA TGCTTTTGAT
TTAAATAAAC TGGAACACAA AAATATTAGG GTTGCTTTAT CAAAAGATGA AAAATTCAAG
ACCTTGGACG GGAAGACTCA TCAGTTAAAG GATGGCGAGG ATATCGTTGT CTATGATGAT
GAGGAACCAC AAATGTTGGC CGGTGTCATG GGTGGCACCA AGTCGGAAGT TACTGAAAAA
ACCAGAGACG TTGTTTTGGA ATCGGCTGTT TTTAATCCAA TTTTAGTTCG TAAAACAGCT
CGGCGTTTTA ATTTGCATTC GCAAGCCAGC CAACGTTTCG AACGGGGAAT TGATATCAGC
AATTGCAAAA ATGCCTTGAA TTTTGCCGCT GCTTTGCTTC AAGAAGTTGC TGGAGGGGAA
ATTGCCAAGG GGATAATTGC CGGCTTGGAT GATCAATCAT CCGATAAGAA AATTAAAATT
TCTCTTTCAG ATATTAATAA TTATTCAGGA ACTGATGTCA AGCTTGCCGA AGTTGAAAAT
ATCTGGCAAC GTCTGAACTT CGAGTATGAT CTTTCTGGTG AAGAATTTGT TGTTTCGATC
CCAAAACGCC GACCGGATAT TACTATTAAA GCCGATTTGA TTGAGGAATT TGTGCGAATT
TATGGATATG AAAAAGTTCC TGCCCGTTTA CCACAAACAG TTAACAAACA ATCCGGTCTG
ACTGTCGACG AAAAACTTGA TCGAGCGATT AAAAATGTGC TTCTTGGTCT CGGCCTGAAT
CAGGCAATTT CTTATTCGCT GACTGATACT GAGGCCGCTG GTACCTTCAC TCTTGGAAAG
GGCGATGAAG TTTCTTTATC TCATCCAATG AGTCAGGAAC ATTCGGTAAT GCGCCAATCG
ATCCTATCGA CTTTGTTGCA GGCAGCTTCT TACAATGCGG TACGCGAAGC TGACGATATT
CGTTTATTTG AAAGTGGAAC GGTTTTTTTC AAACAAAATG GCGTCCAATT GCCAAAAGAG
GATCATCAAG TTGCTGGATT AATTTCCGGC GTTCCGAATA GCAACTGGCA GCATAATCAA
AAGAAATATG ATTTCTATTA CATCAAGGGC ATTTTGGAAA GTTTTTTAAG TAGCCTTGCT
TTAAAATCGA TAATTTCTTA TCAAGCTAGT GACCAGCACA AAGAAATGCA TCCGGGGAGA
ACAGCTGATG TATATGTAGG CGATCATTAT CTTGGTTTTG TTGGGCAGAT AAATCCAAAA
ATATCAAAGA AATACAAGAT GAATTCGGTT TTCGTTTTTC AAATCGATTC AGATTTAGTC
CATGAGCTTT ATAAAATGAA TCAGGATTAT ACACCCTTGG ATAAGTTTCC AGGAACTGAA
CGCGATCTCT CTTTGTTGGT TGACAAAAAA ATAGAATCGG CAGAAATAGA GCGAGTAATC
AAAGCGAATG CGGGTAATTA TCTTCGCAAA CTTCAGGTCA TTGATCTTTA TCAAGGGAAA
GAACTTGGTG AAGATAAAAA ATCAATTTCT TATCGACTTG ATTTTGTTAA CACTCAAGCG
ACTATAACTG ATGCTCAAGT TAATCAATCA ATCAAAAGAA TAGAAGGGGA ACTAACAAAA
CAACTATCGA TTATGGTTAG ATAA
|
|---|
| Protein sequence | MKVSVNWIKE YMPDFPVNDQ VDAQKVADRL ALTSTEVAEN GYQIPQSSNL VVGKVLEIRT
IENSSHLKIA IVNAGKKDYQ IVTGAPNIEK NQLVVLALPG ALLPNGKKIE ATTLDGEISQ
GMLVSLQEIG FDDSIAPKKH EAGIYVFPKD NDVKVGDDAV KALGIDDLMI DTELTANRGD
MLSIRGNLYE FSALLEKEFK LPSLDLQESS KLSKSQISVN VDPKLADRYY LRIINNVKVE
ESPLWLQRRL WNSGLRPINN LVDVTNYVML LFGQPMHAFD LNKLEHKNIR VALSKDEKFK
TLDGKTHQLK DGEDIVVYDD EEPQMLAGVM GGTKSEVTEK TRDVVLESAV FNPILVRKTA
RRFNLHSQAS QRFERGIDIS NCKNALNFAA ALLQEVAGGE IAKGIIAGLD DQSSDKKIKI
SLSDINNYSG TDVKLAEVEN IWQRLNFEYD LSGEEFVVSI PKRRPDITIK ADLIEEFVRI
YGYEKVPARL PQTVNKQSGL TVDEKLDRAI KNVLLGLGLN QAISYSLTDT EAAGTFTLGK
GDEVSLSHPM SQEHSVMRQS ILSTLLQAAS YNAVREADDI RLFESGTVFF KQNGVQLPKE
DHQVAGLISG VPNSNWQHNQ KKYDFYYIKG ILESFLSSLA LKSIISYQAS DQHKEMHPGR
TADVYVGDHY LGFVGQINPK ISKKYKMNSV FVFQIDSDLV HELYKMNQDY TPLDKFPGTE
RDLSLLVDKK IESAEIERVI KANAGNYLRK LQVIDLYQGK ELGEDKKSIS YRLDFVNTQA
TITDAQVNQS IKRIEGELTK QLSIMVR
|
|---|
| |