Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0885 |
Symbol | |
ID | 4415176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 824429 |
End bp | 825172 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639669090 |
Product | response regulator |
Protein accession | YP_810468 |
Protein GI | 116490924 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0355946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTT TAGTCGTGGA TGATGAACCT TTGGCTCGTG ACGAATTAAG TTATTTGCTA AAACAGAATC GATTAACCGA TTCTGTTTAT CAGGCTGATT CCATCGGAAC GGCAGTTGAT AAATTGCTGC AGGAAAAAAT CGATGTCATT TTTATCGATA TATCATTAAA TGATGAAAAT GGTTTTCAAT TAGCAAATGA ATTAAAAAAA CTTATTCATC CACCATTGAT TGTTTTTGCA ACTGCTTTTG ATAGCTATGC TGTCAAAGCT TTTGATGTCG ATGCAGTCGA TTACGTTCTC AAACCCTTTG AACAGTCTCG AGTTAATCAG GCTTTGGAGA AAGTTCAGGC AATTTTTAAG CTTCAAGCAA AAAAAGACAA TTCGTTGACT GTAAATTCCC ATTTCGGGTC GGAGAAAACG AAAATTATAT CGATTACCAG TGATGATAAA ACGAAAATTA TCAAACAACA CGATTTAATT ATGGCGACTA TTAAGGATGG GGCTTTGACT TTAATTACAA ACGGTCAATC ATACAGTACC CGTCAATCTC TTGGTTGGTT GCTTAGTCGT CTTAACAAAA ATGATTTTCT GCAGGTCCAC AGAAGTATCA TTGTAAATAT AAATTCTATC TCGGAGCTTG AACCTTGGTT TAATCATACC TACCAATTAA AATTAACGAA TGGTATGAAG GTTCCGGTTA GTCGTTCTTT TATAAAGGCA GTTAAAAAAA GATTGATGAT GTGA
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Protein sequence | MKILVVDDEP LARDELSYLL KQNRLTDSVY QADSIGTAVD KLLQEKIDVI FIDISLNDEN GFQLANELKK LIHPPLIVFA TAFDSYAVKA FDVDAVDYVL KPFEQSRVNQ ALEKVQAIFK LQAKKDNSLT VNSHFGSEKT KIISITSDDK TKIIKQHDLI MATIKDGALT LITNGQSYST RQSLGWLLSR LNKNDFLQVH RSIIVNINSI SELEPWFNHT YQLKLTNGMK VPVSRSFIKA VKKRLMM
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