| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0844 |
|---|
| Symbol | |
|---|
| ID | 4416103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 791195 |
|---|
| End bp | 792349 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639669051 |
|---|
| Product | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| Protein accession | YP_810430 |
|---|
| Protein GI | 116490886 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0151253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAA AACCAGTTTT ACAAGTTAAA AATTTATCAG TAGAATTTCA TACCTACGCC
GGTACAATCA AAGCAATTAG AAACGTTTCC TTTGAACTTA ACAAAGGCGA GACCTTGGCA
ATTGTTGGCG AATCAGGCTC CGGCAAATCC GTTACAACAC ATACTTTAAT GGGCTTAAAT
GCAAGTAATG CGACAATTTC CGCCGGCCAC ATTTTCTATA AAGGAAAAGA TTTACTGAAG
TTCAGCGAAG AAGAATTCGA GGAACTTCGC GGCGGCGAAG TTGCGATGAT TTTTCAGGAT
CCAATGACGA GTCTTGATCC GACCATGAAG ATCGGAAAAC AGATTATGGA AGTCATTCTC
CTTCATGATG AAGATATTGA AAAAGAGCAG GCTGCTGCAA AGGCATTGGA ATTAATGAAA
CAAGTTGGTA TTCCAAATGC CGAAGAACAT TTTCAGGATT ATCCGCACCA ATGGTCCGGT
GGTATGCGCC AACGTGCTGT TATCGCTGTT GCCTTGGCAG GAAATCCGGA TATTTTGATT
GCCGATGAGC CAACGACTGC TCTAGATGTT ACTATTCAAG CTCAAATTCT TCATTTAATG
AAAGAAATTC AATCCGAAAT TGATTCTTCG ATTATTTTTA TTACTCATGA TCTTGGTGTT
GTCGCCGGCA TGGCTGATAA AGTGGCTGTT ATGTATGCTG GTCAAATTGT CGAGTACGGC
ACGACGGAAG AAATTTTTTA TAATCCTCAA CATCCTTACA CTTGGGGTCT TTTAAATTCA
ATGCCGACTA CCGATATTGA TACGGATGAA CTTTCTTCGA TCCCCGGTAC GCCACCGGAT
TTACTTAATT TGCCAAAAGG CGACCCTTTT GCTCCCAGAA ATCGCTATGC TTTGGATATT
GACTATGAAG AAGAGCCACC ATTTTTCCAA TTGAGTGATA CGCATTATGC AGCTACCTGG
CTTTTAGATA AACGCGCACC TAAAATAACT CCTCCAAAAG AAATCTTGAA GCGTTGGGAC
AAATGGAAGA AATTTGGGAG CAAAAGTGCT CTGCCAAAAA TTTCAAAGTT TGGTGTTGCC
GAAAAAAAGA AGACGGCCAA AGAAACTGCT GTTCCAAAAA GCGGAGCTGA AGTAACTGGA
AAGGACAATA TATGA
|
|---|
| Protein sequence | MTEKPVLQVK NLSVEFHTYA GTIKAIRNVS FELNKGETLA IVGESGSGKS VTTHTLMGLN
ASNATISAGH IFYKGKDLLK FSEEEFEELR GGEVAMIFQD PMTSLDPTMK IGKQIMEVIL
LHDEDIEKEQ AAAKALELMK QVGIPNAEEH FQDYPHQWSG GMRQRAVIAV ALAGNPDILI
ADEPTTALDV TIQAQILHLM KEIQSEIDSS IIFITHDLGV VAGMADKVAV MYAGQIVEYG
TTEEIFYNPQ HPYTWGLLNS MPTTDIDTDE LSSIPGTPPD LLNLPKGDPF APRNRYALDI
DYEEEPPFFQ LSDTHYAATW LLDKRAPKIT PPKEILKRWD KWKKFGSKSA LPKISKFGVA
EKKKTAKETA VPKSGAEVTG KDNI
|
|---|
| |