Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0556 |
Symbol | |
ID | 4415837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 535652 |
End bp | 536548 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639668779 |
Product | ABC-type phosphate transport system, periplasmic component |
Protein accession | YP_810166 |
Protein GI | 116490622 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
TIGRFAM ID | [TIGR02136] phosphate binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00147571 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA ATTTGATCAG AATTGGAATA ATTTTAATCG CTGTTTTGGC GCTCTATTAT GGATCGACTC ATCGGGGTTT GACCAGTAAT ACGGTTAGCT CTACCCATGC AACAACTAAA AACATTTTAA TTGTTGGCTC GACAGCGCTT CAGCCTTTGG TGGAAAAGGC AAGTTCGATG TATGAAAAAG AAAATCCAAA CACTTCTATT TCGGTTCAAG GTGGTGGCTC TGGTGCCGGC TTAACACAAG TTCAAGCTGG CTCGGTCCAA ATTGGTGATT CGGATATCTT TGCTTCTCAA GAAGAGGGAA TCAAGCCGAG CAAAATTGTC GATCACAAGG TTGCTGTTGT AGGAATAGCA CCAGTTGTTA ACAAAGATAT AAACGTCAGC AATCTATCCA TGAAACAATT GCGGGATATT TTTACCGGCA AAATAACCAA TTGGAAAGAC GTTGGTGGAC CGGATATGGC AATTACAGTT GTCAACCGTT CGAGCGGTTC CGGTACTCGA ACTGTTTTTG AAGATTCTGT TTTAAAAGGA GAAACTGCTG TTAAAGCTCA GGAACAAGAC AGTAACGGGA CGGTACAGAA GATTATTTCT TCTACACCGG GATCAATATC CTATTTAGCA TCCGGTTATA TTTCCGGAAA GAATTTAAGG GCGGTCAAGG TAGACAATGT TAGCCTTACT ACTGAAAATA TTGAGAATAA TAAGTGGAAA ATCTGGGGTT ACGAGCACAT GTATACACAC GGAAAAGCGG AAGGCCAAAC TGCTAGTTTT ATCAAATATT TTAAATCGAA GAAAGTTCAA AACGGAATTG TCAAAGAACT TGGTTATATT CCTTTAGCCG GTATGAAGGT TGATAAAAAT TCTCAAGGAA AGGTAACGAG CAAGTAA
|
Protein sequence | MKKNLIRIGI ILIAVLALYY GSTHRGLTSN TVSSTHATTK NILIVGSTAL QPLVEKASSM YEKENPNTSI SVQGGGSGAG LTQVQAGSVQ IGDSDIFASQ EEGIKPSKIV DHKVAVVGIA PVVNKDINVS NLSMKQLRDI FTGKITNWKD VGGPDMAITV VNRSSGSGTR TVFEDSVLKG ETAVKAQEQD SNGTVQKIIS STPGSISYLA SGYISGKNLR AVKVDNVSLT TENIENNKWK IWGYEHMYTH GKAEGQTASF IKYFKSKKVQ NGIVKELGYI PLAGMKVDKN SQGKVTSK
|
| |