Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0460 |
Symbol | |
ID | 4416516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 448803 |
End bp | 450794 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639668693 |
Product | threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase |
Protein accession | YP_810082 |
Protein GI | 116490538 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0696284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGATT TAATAAAGAT CACAATGCCG GACGGCACGG AAAAAGAAGT TGAACAAAAT ACGAAACCAA TAGAAATCGC TGAATCGATT AGTCCTTCTT TGGCTAAGAA ATCGGTTGTC GCTAAAATTG ATGATCATTT TGTCGGCATG AATGAAGGAA TTCGTTTTAG CGGCAAATTT AGGCTCGTTA CCAAAGGAGA AGATGAGGCA CTGAAAGTTC TGCGCCATTC GACAACTCAT CTTTTAGCAC AGGCTTTGCG CCGTTTACAT CCCAAGATTC ATTTTGGCGT AGGCGTGGCG ATTGCAAACG GTTTTTACTA TGATACAGAT GATTCTGATG AATCGGAAAA GCAGGTCGCA GCCGATGAAT TTCCGAAAAT TGAAGCGGAA ATGAAGAAAT TGGTTCAGGC AAATATCCCA ATTCAGCACC AGATTGTCAG CCGTAAGGAA GCTCTGAAAA TTTTTGCCGA AGATCCCTAT AAAATTGCTC TAATTAATGA TTTTCCAGCA GACCAGGAAA TAACAATTGT AAAACAAGGC GATTATACGG ATCTTGATCG TGGTGGCTTA GTACCTTCGA CCGGTTGGAT CAAGCATTTT GCTCTGACTT CTGTTGCCGG TGCTTACTGG CGTGGTATGT CCGATAACCA AATGATGCAA AGAATTTACG GCCTGTCAGA ATGGAATCCT GAGAATCTTG AAGCACAAAA GAAAGCTCTT GAAGAAAGAA AAGAACGCGA TCATCGAACG ATTGGCAAAC AAATGGAGCT TTTCTTTACG AACCCGGAAA TTGGTGCCGG ATTACCGGTT TGGTTGCCGA ATGGCGCAGC AATCCGGCGG ACAATTGAAG ATTATCTGGT TGAAAAGGAA CGCCAAAACG GTTATATGAA TGTTTATACC CCGGTTGTTT CCAATCTTGA TTTGTATAAA CGCTCGGGTC ACTGGGATCA TTATCGCGAC GATATGTTTC CAGCTATGAC GGCCGATGAT GGCGAACAGT TGGAACTTCG GCCGATGAAC TGTCCTTCGC ATATTGAAAT TTTCGAACAT GAGCCGCGTT CTTACCGTGA TTTGCCTTAT CGAATAGCTG AATTCGGTCA AATGCATCGT TGGGAGAAAT CTGGAGCTTT GACAGGCCTC TCCAGGGTCC GCGAAATGAC CTTAAACGAT GGTCATACTG TTGTAGCCCC TGAACAGGTC GAACCGGAAT TCAAAGGAAT TCTCCAGTTG ATTCGTGATG TTTATCATGA TTTTGGTTTT ACGGATCAGG ATTACCGTTT TCGTCTTTCT TATCGCGATC CGAAAAATAC AAAGAAATAT TATGATGACG ATGCAATGTG GGAACACGCT CAAGCTGCTT TGAAACGTGC CATGGATGAT ATGGGGCTCG ATTATTTCGA AGCCGAAGGA GAGGCGGCTT TCTATGGACC AAAGCTCGAT ATTCAGTTCA AAACAGCTCT TGGAAACGAA GAGACGATGT CGACGATCCA GTTGGATTTC TTATTGCCGG AACGCTTTGA TATGAAATAC ACCGGCGAGG ATGGCAAAGA TCATCGTCCG GTTTTGATTC ACCGCGGCGT GGTCGGCACA ATGGAACGCT TCGTGGCTTT CTTGATTGAA AAATACAAGG GTCAGTTCCC GACTTGGTTG GCTCCGGTAC AGGCTGTTGT TATCCCGGTT AATTATGGTG CCCATGGCGA TTATGCACGG AATATATATA GTAAATTGAT GAAAGACGGT CGCCGAATTA AGTTGGATAA TCGTGATGAA AAGCTCGGAT ATTTAATTCG CGATGCTCAG GTAAATTTGA AGACACCGTA TATTTTGGTT GTTGGCGATC AGGAATTGCG TGATAATAGT GTTACTGTTC GTTTCCGTGG AAGCGATCAA ACCAAAGAAA TGAAAATCGA TGAATTCGAA GAAATGATTA ATGATGATGT TGCCAATTAT TCCAAAGGCA GCGAAAAAGT TCGGGAGATG TTAAATAAAT GA
|
Protein sequence | MADLIKITMP DGTEKEVEQN TKPIEIAESI SPSLAKKSVV AKIDDHFVGM NEGIRFSGKF RLVTKGEDEA LKVLRHSTTH LLAQALRRLH PKIHFGVGVA IANGFYYDTD DSDESEKQVA ADEFPKIEAE MKKLVQANIP IQHQIVSRKE ALKIFAEDPY KIALINDFPA DQEITIVKQG DYTDLDRGGL VPSTGWIKHF ALTSVAGAYW RGMSDNQMMQ RIYGLSEWNP ENLEAQKKAL EERKERDHRT IGKQMELFFT NPEIGAGLPV WLPNGAAIRR TIEDYLVEKE RQNGYMNVYT PVVSNLDLYK RSGHWDHYRD DMFPAMTADD GEQLELRPMN CPSHIEIFEH EPRSYRDLPY RIAEFGQMHR WEKSGALTGL SRVREMTLND GHTVVAPEQV EPEFKGILQL IRDVYHDFGF TDQDYRFRLS YRDPKNTKKY YDDDAMWEHA QAALKRAMDD MGLDYFEAEG EAAFYGPKLD IQFKTALGNE ETMSTIQLDF LLPERFDMKY TGEDGKDHRP VLIHRGVVGT MERFVAFLIE KYKGQFPTWL APVQAVVIPV NYGAHGDYAR NIYSKLMKDG RRIKLDNRDE KLGYLIRDAQ VNLKTPYILV VGDQELRDNS VTVRFRGSDQ TKEMKIDEFE EMINDDVANY SKGSEKVREM LNK
|
| |