Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0305 |
Symbol | |
ID | 4416231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | - |
Start bp | 293675 |
End bp | 295114 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639668553 |
Product | Na+/xyloside symporter or related transporter |
Protein accession | YP_809946 |
Protein GI | 116490402 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0574168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA TCAAACAATA CATATCCTAT GCCTTTGGTG CATTCGGACA CGATGCATTC TATGCGACAT TAAGTACCTA TTTCATGATT TTCGTGACCA GCCAGCTCTT CTCGTCGAGT AATCATTCGC TTGATGACAA AATGATTGGC TATATCACAA CAATGATAGT TGTGATTCGT TTAGTAGAAA TCGCTTTTGA TCCCCTGATC GGAGGAGTTG TTGACAATAC CCGAACGCGT TGGGGAAAAT TCAAGCCTTG GATTATGATT GGAGCGACGA TCAGTTCGAT TGGTTTAATT CTTATATTTA CAAATTTTGG TGGATTAAAC TACAGTAATC CAATTTTGTA TCTAATTCTT TTTGGAATTG TTTTTGTTAT TTTGGATGTT TTTTACTCGT TCAAAGACAC CGCTTTTTGG TCAATGCTTC CGGCATTTAC ATTGAGTTCT TCAAAACGGG CGAAATTCAG TAGTATCGCT CGTTTGGGAT CGACCCTTGG TTCACAGGGT GTCATTATCG TTATTGTTCC CTTGGTTACA ATTCTTTCGG GAATGTTTGG AGCGAAAAGT GGTCAAGAGA ACCAAGCCGG TTGGTTGGGT TTTGCGATCG TAATTGGTTT GATTTCCTTC CTTGGAGCTT TGGCAACTTC GGTTGGTACC AAAGAGGAAC ACAATATTAT TCGTGAAAAT ACCGAGAAAA TTCATCTTGT CGATGTTTTC AAAGTAATTT TTAAAAACGA TCAATTAATG TGGCTGGCTT TGTCCTACTT CATGCTTGCC TTTTCTTACA CTGTTACAAA CTCTCTTTTC ATTTACTACT TCAAATATGT CATGGGAAAA TCCGGTTCCT TCTACATTGT CGGCATTATC ACTGCGATTC TGGGAATCAT TTCCGTTTCG CTTTTCCCGG CTCTGGAAAA ACTAATTCAC CGAAAGGCAA TTTACGTTGG TGGAATTGTC ATGATGCTGA TTGGATACAC AATCTTTATT TTTTCCGGTA CCAATGTCGT TGCTGTTTTG ATTGGAATTT CTCTGCTTTA TTTCCCTTAT CCATTGATCT TCTTGGCCGC TTTAATGACA ATTGCCGACA GTGTTGAATA CGGCCAGTTA AAGAGTGGTA ATCGAAATGA ATCGGTTACT TTAGTTGTTC GTCCTTTGCT TGATAAACTC GGTGGAGCTT TCGCGAATGG AATCGTTGGT ATTACTGCAA TCTTCTCCGG TATGACCGGT AACGCCAAGC CAAGTAGTAT CAGTGCTCAC GAATTATTTA ATTTTAAGTT CTATATGTTT TACGGTCCGA TGGTACTTTT GATTATTGCT GCATTAGTCT ATTTCTTCAA AATCACTTTG ACAGAAAAAG AACACGATAA AGTAATTGCC GAACTGGAAA ATAAGTTGTC CCATGAGGAT GATAAAAAAA TTACAACCAA AGGAATTTAG
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Protein sequence | MKQIKQYISY AFGAFGHDAF YATLSTYFMI FVTSQLFSSS NHSLDDKMIG YITTMIVVIR LVEIAFDPLI GGVVDNTRTR WGKFKPWIMI GATISSIGLI LIFTNFGGLN YSNPILYLIL FGIVFVILDV FYSFKDTAFW SMLPAFTLSS SKRAKFSSIA RLGSTLGSQG VIIVIVPLVT ILSGMFGAKS GQENQAGWLG FAIVIGLISF LGALATSVGT KEEHNIIREN TEKIHLVDVF KVIFKNDQLM WLALSYFMLA FSYTVTNSLF IYYFKYVMGK SGSFYIVGII TAILGIISVS LFPALEKLIH RKAIYVGGIV MMLIGYTIFI FSGTNVVAVL IGISLLYFPY PLIFLAALMT IADSVEYGQL KSGNRNESVT LVVRPLLDKL GGAFANGIVG ITAIFSGMTG NAKPSSISAH ELFNFKFYMF YGPMVLLIIA ALVYFFKITL TEKEHDKVIA ELENKLSHED DKKITTKGI
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