Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0268 |
Symbol | |
ID | 4415209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 257603 |
End bp | 258496 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639668522 |
Product | ribose/xylose/arabinose/galactoside ABC-type transporter permease |
Protein accession | YP_809915 |
Protein GI | 116490371 |
COG category | [R] General function prediction only |
COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.603653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGA TTGTATCTGC AATTGGACAG GGGCTGTTAT GGGGAATACT TGGAATTGCC CTGTTCCTAA CTTTTAGAAT TTTGAATTTT CCCGATATGA CTGTTGAAGG AACTTTTCCT TTAGGCGCGG CAACGGCTGT CAGTTTGATT ACACGCGGCG TCAGTCCGAT CTTGGCAACT TTAGCGGCTT TTATCGCTGG TGCCTTGGCA GGTGGAATTA CCGGTCTGCT TTATACGAAA GGAAAAATTC CAATTCTATT ATCCGGAATT TTAGTCATGA CTGCTTGTCT ATCGGTTAAT TTACGAATTT TGGGTTCTTC CAATGTTTCT TTAATTGGCA AACGGACGAT TTTTTCACCC TTCGCCGGTT TGCCGGAATA CTTTGATGCC GTTTTTATCG GTTTGACAAT GGTTTTTATT GTCACATTGA TAATGATTTA TTTCCTGCAG AGTAATCTCG GCCAGGCCTT CATAGTTACC GGCGATAATC CGATTATGGC CCAATCGATT GGTATTAGAA CTGATCAGAT GACCAACATG GGTTTGATGT TTTCCAATGG TTTAATCGCG ATTGCCGGAG CTGTAATTGC TCAAAACAAC GGTTACGCGG ATATTAATAT GGGAATTGGA ATTATTGTAA TTGCTTTGGC ATCGATCATT ATTGGCGAAG TGGTTTTTGG AGAATTGACG ATGAATCAGC GCCTGATTGC AATTACTTTA GGTTCGATTA TATATCGTTT TGTTCTTTTA ATTGTTTTGC AGCTTGGTTT TTCAACCAAC GATCTGAATC TTTTATCAGC GATTATTTTG GCTTTCTGCC TGATGTTGCC ACGATTCAGC CAGGCACTGC ATTTGGATCG AGTAATGAAG AAGGGACTTT TTGTCAATGA CTGA
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Protein sequence | MNMIVSAIGQ GLLWGILGIA LFLTFRILNF PDMTVEGTFP LGAATAVSLI TRGVSPILAT LAAFIAGALA GGITGLLYTK GKIPILLSGI LVMTACLSVN LRILGSSNVS LIGKRTIFSP FAGLPEYFDA VFIGLTMVFI VTLIMIYFLQ SNLGQAFIVT GDNPIMAQSI GIRTDQMTNM GLMFSNGLIA IAGAVIAQNN GYADINMGIG IIVIALASII IGEVVFGELT MNQRLIAITL GSIIYRFVLL IVLQLGFSTN DLNLLSAIIL AFCLMLPRFS QALHLDRVMK KGLFVND
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