| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0209 |
|---|
| Symbol | |
|---|
| ID | 4415799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 197377 |
|---|
| End bp | 198093 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639668470 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_809863 |
|---|
| Protein GI | 116490319 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTACAT TTTTTTCAAG ATTCAAAGAA TCAAAAATTA ATCTCAAAGA AAGTGATTTG
ATTGACAGTG TAAAAAATAA TCCTTCCAAA GATCGAAAAA TTCTTCTTCC CAATAAATTC
ACCTTGGCAG ATTATGAGCA GTCAGTAATC TTAATACATA AAATTTTGTC TTCTCGAAGC
GAGTCTTCAT ATTTGCAAAT GAGAGATTAT CTAACTTCGG CGTTGTTAAT TCAATTATTT
AATTCGTATA TTTCCAATAG CTATATAAAT GAAGAGGACA GCCGGGCCAG TTTTATTAAA
GAGTGGATAA GAGCGCATAT ATCATCAACA TTAACTGTCC CAGGAATTGC TAAACAGCTC
GAATTGAATC CTGATTATTT AACAAGAATA TTCAAAAAAT GTACCGGTAT GACGATGTTA
CAGTATCTAA ATCATCTTAA AATCGAAGTA GCAACGACAT TACTGGTTAG AACCGAAATG
TCAGTAAAAC AAATTTCTAG TCGAGCTTAC TTTAACGACT CAAAAGTATT CATTCGAAAG
TTCCATCAGG AACTTGGCCT TTCTCCAACT GAATATCGTA AATCATATCA TCTGATTCAC
TTAAATAATC CACACATAGA TCCTCAAATA CCAATACCTA AGGATATTGC TGATTCAATT
GACTTCATTC CAGAGAATGG AAATATTAAA GAAAATGACT TCTTGGTGAA AAAATAA
|
|---|
| Protein sequence | MVTFFSRFKE SKINLKESDL IDSVKNNPSK DRKILLPNKF TLADYEQSVI LIHKILSSRS
ESSYLQMRDY LTSALLIQLF NSYISNSYIN EEDSRASFIK EWIRAHISST LTVPGIAKQL
ELNPDYLTRI FKKCTGMTML QYLNHLKIEV ATTLLVRTEM SVKQISSRAY FNDSKVFIRK
FHQELGLSPT EYRKSYHLIH LNNPHIDPQI PIPKDIADSI DFIPENGNIK ENDFLVKK
|
|---|
| |