Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0011 |
Symbol | |
ID | 4415403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 12145 |
End bp | 12702 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639668285 |
Product | single-stranded DNA-binding protein |
Protein accession | YP_809666 |
Protein GI | 116490137 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000915981 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAATC GAGTTGTATT AGTTGGTAGA TTAACCCGCG ACGTTGAGTT GCGTTATACA GGAAATGGTG ATGCAGTTGG ATCATTTACA ATCGCTGTCG AACGAAATTT CACGAATCGC GCTGGTGAGC GCGAGGCTGA TTTTATCAGT TGCGTGATTT GGCGTAAACC TGCCGAAAAC TTTGCCAATT TTACAGGTAA AGGAGCAATG GTTGGCGTCG AAGGCCGAAT TCAGACCAGA ACTTACGATA ATAATCAGGG ACAGAAGGTT TATGTGACCG AGGTTGTTGT TGATAATTTC CAATTATTGG AGACACGTGC TCAATCTGAA GCGCGTCGTT CGCAAAATGG CAGTGCTGGT AACACGGGGA ATACCGCTCC GCAAAGTCAG AGTAATTTCA ATATTCCTAA TCAACAGTCA AATCCATTTG ATTCGCAATT CAACAATAAT GCGAGTTCCG CTTCAACTAA TAGTCAAACG AGTTCTTCCA GCAGTCCTTT TAATACAGAC ACCGGGAATG ATTCGCTTGA TATCTCGGAT GATGATCTTC CGTTTTAA
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Protein sequence | MINRVVLVGR LTRDVELRYT GNGDAVGSFT IAVERNFTNR AGEREADFIS CVIWRKPAEN FANFTGKGAM VGVEGRIQTR TYDNNQGQKV YVTEVVVDNF QLLETRAQSE ARRSQNGSAG NTGNTAPQSQ SNFNIPNQQS NPFDSQFNNN ASSASTNSQT SSSSSPFNTD TGNDSLDISD DDLPF
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