Gene Nwi_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3061 
Symbol 
ID3674525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3326524 
End bp3327249 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID637714626 
Productacetoacetyl-CoA reductase 
Protein accessionYP_319661 
Protein GI75677240 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.109458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.323939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAG TGGCGCTGGT AACCGGAGGG ACTCGCGGAA TCGGCGGGGC GATCAGCAAA 
GCGCTGAAAG CGGCCGGCTA CAACGTCGCG GCGAGCTACG CCGGCAACGA CGCGGCGGCG
GAGAAGTTCA AGGCGGAAAC CGGGATTCCC GTCCACAAAT GGGACGTCGC CTCGTTCGAG
GCCTGCGCCG GCGGCATCAA GCAGGTCGAA GCGGACCTCG GGCCCGTCGA GGTGCTCGTG
AACAATGCCG GCATCACCAA GGACACGGCC TTCCACAAAA TGACGTTCGA GCAGTGGAGC
GCCGTCATCA ACACCAATCT CGGCTCGCTG TTCAACATGA CGCGCCCGCT GATCGAGGGG
ATGCGGGCGC GCAAGTTCGG CCGCATCATC AACATCTCGT CGATCAATGG CCAGAAAGGC
CAGTTCGGCC AGGTGAACTA TTCGGCGGCG AAGGCCGGTG AGATCGGCTT CACCAAGGCC
TTAGCGCTGG AGAACGCCAA GACCGGAATC ACCGTGAACG CGATCTGCCC GGGTTACATC
AACACCGAGA TGGTGCAGGC GGTGCCGAAG GATGTCATCG AGAAAAGCAT CCTGCCGCAA
ATTCCGGTGA CGCGCCTCGG CGAGCCCGAG GAGATCGCGC GCGCGGTGGT CTTCCTCGCC
GCCGACGACG CCGGCTTCAT CACCGGCTCG ACGCTTTCCG TCAATGGCGG GCAGTATCTG
GCGTAG
 
Protein sequence
MARVALVTGG TRGIGGAISK ALKAAGYNVA ASYAGNDAAA EKFKAETGIP VHKWDVASFE 
ACAGGIKQVE ADLGPVEVLV NNAGITKDTA FHKMTFEQWS AVINTNLGSL FNMTRPLIEG
MRARKFGRII NISSINGQKG QFGQVNYSAA KAGEIGFTKA LALENAKTGI TVNAICPGYI
NTEMVQAVPK DVIEKSILPQ IPVTRLGEPE EIARAVVFLA ADDAGFITGS TLSVNGGQYL
A